Vreelandella piezotolerans: GYM47_08405
Help
Entry
GYM47_08405 CDS
T07036
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hpiz
Vreelandella piezotolerans
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpiz01011
]
GYM47_08405
Enzymes [BR:
hpiz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GYM47_08405
Peptidoglycan biosynthesis and degradation proteins [BR:
hpiz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GYM47_08405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
SLT_2
DUF429
LysM_RLK
Motif
Other DBs
NCBI-ProteinID:
QJA24127
LinkDB
All DBs
Position
complement(1844181..1845404)
Genome browser
AA seq
407 aa
AA seq
DB search
MTYRTIRQRLLLSAGSTVVMGLFLAAAASSQASATDPNLTYTTVNDAVANNGNERTARFQ
PTALHHHFWESLVLEPQDAWSSLRSSFQWQDKNLPADAQSRVDEWIEYYRSSPENIAAIT
ERATPWLAWIAQQVSDRGLPGEIALIPFVESSFDPSARSHLGAAGLWQFMPGTGDALGLV
RNGNYDGRLDVVTSTEAALDYLEMQADEWYEGDLMLSLAAYNAGAGTVNRAQRQAQSQGL
AGKYWDLSLPHETMQYVPKLKAIATIINEPDKYGVKLPDIHPDPAFAKVQLEQPVSLAQA
SQLLDVSQSALAELNPGLLNGSLDPRSAQTLLVPEEVDTQVLAQLSQANDTTLASTATPE
VHRVERGDNLSTIAARYNVDQQDLIRWNAIERPEALQPGQLLSLSDR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcgaacgattcgccagcgcttattgttaagcgctgggagtaccgtagtaatg
ggcctttttttggccgctgcagccagctcacaagcatctgccaccgatccgaatctgacc
tataccaccgtcaatgatgccgtggcgaataatgggaacgaacgtaccgcacgcttccag
cccactgcgctgcatcaccacttctgggagtcgctggtactggagccccaggatgcgtgg
agctcgctacgctcgagcttccagtggcaggataagaaccttcccgccgatgctcaatcc
agagtcgatgaatggatcgagtactatcgctctagcccggaaaacatcgcggccattacc
gaacgtgccacaccgtggctcgcttggatcgctcaacaagtgagtgaccgcggcttaccc
ggtgaaatcgctctgattccctttgtcgagagctcctttgaccctagcgcacgaagccat
ctcggtgcagccggcttatggcagttcatgcccggtacgggtgacgcattggggctagta
cgtaatggcaactatgacggccgattggatgtggtcacttcgacggaagcagcgctggat
tatctggaaatgcaggccgatgagtggtacgagggagatctgatgctctcgctagccgct
tataatgcgggcgcaggcaccgtcaatcgtgcccagcgccaagcacagagccaagggcta
gccggcaaatattgggacctatcactgccccatgaaaccatgcagtacgtacccaagtta
aaagccattgccaccatcatcaacgagcccgacaagtatggcgtcaaactgccggacatc
catccagatcctgcctttgccaaagtgcagctggagcagcccgtcagcttggcacaagca
tcccaactattggatgtcagccaatcagcgctagccgagctaaaccctggtctgctcaat
ggcagcctcgacccacgtagcgcgcagacgctcctggtgccagaagaggtagatacgcag
gtattagctcagctttcgcaagccaacgacacgacgctggcctcgaccgctaccccagag
gtgcatcgcgtcgagcgaggggataatctgtcaacgattgctgcccgatataacgttgat
cagcaagacttaatccgctggaatgctatcgagcgccccgaagcccttcagcctgggcag
ctactgtcactctcggatcggtag
DBGET
integrated database retrieval system
