Vreelandella piezotolerans: GYM47_09210
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Entry
GYM47_09210 CDS
T07036
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpiz
Vreelandella piezotolerans
Pathway
hpiz03030
DNA replication
hpiz03430
Mismatch repair
hpiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GYM47_09210
03430 Mismatch repair
GYM47_09210
03440 Homologous recombination
GYM47_09210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpiz03032
]
GYM47_09210
03400 DNA repair and recombination proteins [BR:
hpiz03400
]
GYM47_09210
Enzymes [BR:
hpiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GYM47_09210
DNA replication proteins [BR:
hpiz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GYM47_09210
DNA repair and recombination proteins [BR:
hpiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GYM47_09210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
PAS_4
PAS
PAS_8
Motif
Other DBs
NCBI-ProteinID:
QJA24272
LinkDB
All DBs
Position
2007225..2009282
Genome browser
AA seq
685 aa
AA seq
DB search
MTFKGLPKRQRLVGAWLLLSGISLLGGVLFAAWLDSQIALSSLARVALWLGSLSGGMTLC
LMGVLLERRLLAPLRHLQTQLARWVANPDAQDEEAPEGWLKGLGPDLRRVSQSWRADRMR
LATAHAEGARSASRIRQELETLLQVLETPLLLCDRHRRVMLFNQAAETFFTGNTGLGLGK
RLDALLPTATLANAMAQLPDDGSPREMLTHCGQRWVKVVIRRVPGSERETLVTCSDATTT
WNNEMGVRAELNRRLPPLRQHAANVSSAVDALRHIHATNVPLELRTRLEGVMHDESQALN
QHVAEFATLLDDLQYHGERLRPIWSNDFWQALDERLDPAHRLITPIGVPAWFKGDAPALI
ELFASLVDHLRCHLPTRGFEGEISLQPKRAYVDLMWQGAPVPEGELSVWRDTILNTLPLG
PAVADILRQHATDIWSVADADKCHARLRLPLPAITQTHAPREMAPPRPEFHDFGIAQLPA
PDEALAHRALRCLEIVAFDTETTGLELRRGDTVVSLGACRIVNGRLLASDAFDHYVDPQR
PIPAASTVIHGITDADVADAEPLHTVLGQFRDYVGDAVMLAHNAAFDMLAISGHGVHFDI
PVLDTLLISKALDEALDGHDLDTLARRYDLHFPPNTRHTALGDARVTAELWLALLPRLEA
RGIDTLEELLALQANAFDKEDASAP
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcaaaggccttccaaagcgacagcgcctggtgggtgcttggctgcttctcagt
ggcatcagcctgctgggcggcgtgctgtttgcggcgtggctggatagtcagatcgcgctc
tccagcttggcgcgtgtggcgctgtggcttggcagcctttccgggggtatgacattgtgc
ctgatgggcgtactgttagaacgtcggttattagcgcccttacggcatttacaaactcag
ttggcccggtgggtggccaacccagacgcccaagacgaggaggctccagaaggttggcta
aaagggctaggccctgatctacgccgcgtcagccaaagctggcgcgccgaccgcatgcgg
ctcgccaccgcccatgccgagggggcgcgtagcgcttcgcgtattcggcaagagttggaa
accctgcttcaggtactggaaacaccactgctgctgtgtgatcggcatcgtcgggtgatg
ctgttcaatcaagccgccgaaacgttctttactggcaataccgggttagggctggggaag
cgcctggatgccctactgccgaccgcaacgctagccaatgccatggcacaactgcccgac
gatggttcaccacgtgaaatgctcacccactgcggccaacgctgggtaaaagtggtgatt
cggcgggttcccggcagtgagcgcgagacgctcgtgacctgtagcgatgccacgaccact
tggaacaatgaaatgggcgtgcgggccgagctcaaccgtcgcctcccgccactgcgccag
catgccgccaacgttagcagtgccgtcgacgcgctgcgtcatatccacgccacgaacgtc
ccccttgaactgcgaacacgcttagagggggtcatgcacgatgagagccaagcactgaat
cagcacgtggctgagttcgccacgctactggatgatcttcagtatcacggtgaacgcttg
cggcccatttggtccaatgacttctggcaggcgctggatgagcgtctcgacccagcccac
cgtttgattacaccgattggtgttcccgcttggttcaaaggggatgccccggcactgatc
gaactcttcgcatcattggtggaccatcttcgctgccacttgcctacccgtggctttgaa
ggagaaatctcgcttcaaccgaaacgtgcctacgttgacttgatgtggcagggcgcgccc
gttcctgaaggcgaactcagcgtttggcgagatacgatcttgaacacgctaccacttggc
ccggcggtggccgatattctgcgtcagcacgctacagatatttggagcgtagccgatgcg
gataagtgccatgctcgactgcgactcccgctacccgcgattacacaaactcacgcgcca
agagagatggctccccctcgtccggaatttcatgattttggtatcgcacagctacctgcg
cccgacgaagccctcgcccatcgggcgctacgctgcttggagatcgtggcgttcgatacc
gaaaccactggcctcgagctacgccggggagacacggtggtaagccttggcgcttgtcgc
atcgtcaatggccgcttattggcaagcgacgcgttcgatcactacgtcgatccccaacgg
cccattcccgccgccagcaccgtcattcatggcattaccgatgcggacgtagcggatgca
gaaccgcttcacaccgtattgggtcagttccgggattacgtaggggacgccgtcatgctc
gctcataatgcggcattcgacatgttggccatcagcgggcacggcgttcatttcgacatc
cccgtgctggacacgctgctgatctccaaagcgctagatgaagcgctggatggacacgac
ctggatacgttagccaggcgttatgatttacattttccgcccaacacccggcataccgca
ctgggcgatgctcgtgtcaccgccgagctttggctagccctcttgccccgcttggaagcc
cgcggtatcgacacgctagaagagctgctggccctccaggccaatgcgttcgataaggaa
gacgccagtgcgccataa
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