Vreelandella piezotolerans: GYM47_10950
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Entry
GYM47_10950 CDS
T07036
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hpiz
Vreelandella piezotolerans
Pathway
hpiz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GYM47_10950 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpiz03019
]
GYM47_10950 (orn)
03009 Ribosome biogenesis [BR:
hpiz03009
]
GYM47_10950 (orn)
Messenger RNA biogenesis [BR:
hpiz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GYM47_10950 (orn)
Ribosome biogenesis [BR:
hpiz03009
]
Eukaryotic type
Pre-60S particles
RNases
GYM47_10950 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RE_XamI
Motif
Other DBs
NCBI-ProteinID:
QJA24582
LinkDB
All DBs
Position
complement(2384047..2384631)
Genome browser
AA seq
194 aa
AA seq
DB search
MSEQNGAPRSDLLVWIDLEMTGLEPDKERIIEVATLITDARLKVVAEGPVIAVKQPDRLL
ANMDDWNQKTHGESGLVARVKASTVETQEAERQTLDFLRQYVVAGSSPMCGNSIHQDRRF
LEREMPELWAFFHYRNLDVSTVKELAKRWNPGALAGFKKQNAHLAMDDIKESIAELAHYR
RTFLRVEEGSDEEE
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaaaacggcgcaccgcgtagtgacctgttggtgtggatcgatttggaaatg
accggtctggaaccggataaagagcgtattatcgaggtggcgacactgatcaccgatgct
cgtttgaaggtcgtggcagaagggccggtgatcgccgtcaagcagcccgatcgcttgctg
gccaatatggacgattggaaccagaaaactcacggtgagtctggattggtggcgcgcgtg
aaagcgagcaccgtcgagacgcaagaagcagagcgtcagacactcgattttttacgccag
tacgtcgttgcaggctcttcgccgatgtgcggcaacagtattcaccaggaccgccgcttt
ttggagcgggaaatgcccgaactgtgggcgtttttccactaccgcaacctggatgtctcg
accgtcaaagagctggccaagcgctggaaccctggtgcgctggcgggcttcaagaagcaa
aacgcccacttggccatggacgacatcaaggagtcgatcgcggaactggcccactatcgc
cgcacgtttttacgcgtggaagagggcagcgacgaagaggagtag
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