Vreelandella piezotolerans: GYM47_13135
Help
Entry
GYM47_13135 CDS
T07036
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
hpiz
Vreelandella piezotolerans
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpiz02000
]
GYM47_13135
Transporters [BR:
hpiz02000
]
Other transporters
Pores ion channels [TC:
1
]
GYM47_13135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
MtrB_PioB
DUF2490
DUF6712
Motif
Other DBs
NCBI-ProteinID:
QJA24970
LinkDB
All DBs
Position
complement(2878673..2880631)
Genome browser
AA seq
652 aa
AA seq
DB search
MSSRLRRSLLASAVASVACTTAVAQETPQLNDIVVTASGFEQQISSAPASISVISREELE
RGYYQNVTDALRDVPGVVVTGGGRGDNGNDISIRGMPSQYTLILVDGRPINSRESRPNGD
AGFEQDWLPPLQAIERIEVVRGPMSTLYGSDAIGGVINVITRKVADTWHGNIQLDTVLQE
DSASGDSRQANFYLSGPLVGERLGLQLYGRTSERDEDDIEYGYEEKSLQSLTARLNLAAS
DNHDFTAEAGITEQDRRSLMGRSGPVDGCRGGCTDSIGEYTNTHVAVTHSGRFDWGTSET
FVQRERSENQSRDIEITNTTAKTSALIPLGMHMVTVGASWEEESLDDSSTNQISDRQTIE
NSQWALFVEDEWMLTDAWALTGGLRLDDDDNYGSHLSPRLYSVWNMTPEWTLKGGVSTGY
RSPNLREITPDWGQVSRGGNIYGNPDLEPETSLNKEIALLYGNVAGLNGSLTLFHNDFED
KITRIACPIDICNDGANQFGSDPTYRVNIDDAVTQGVEASLSAPLSDTLALTASYTFTDS
EQKSGEYAGEPLTQLPRHQVSASLDWDVSARLSQWTKVTYRGEESQPTTGPSQSAIIAPS
YTFVDAGIGYQLNDSTTVNAGIYNLFDERITYDEYGYVDDGRRVWLGLNVAF
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcgtttgcgccgttcgctgctggccagcgctgtcgcctctgttgcctgcacg
accgccgttgcacaagaaacgccccagctcaacgatatcgtggtgacggcctccggcttc
gagcagcaaatcagcagcgcccccgcctcgatcagcgtgatctcccgtgaagagctggag
cggggttactatcaaaacgtcaccgatgccctgcgcgacgtgccgggcgtggtggtcacc
ggcggtggacgtggcgataacggcaacgatatttccattcgcggtatgccgtcgcagtac
acgctcattctggtagatggtcgcccgatcaactcacgcgaatcgcgccccaacggcgat
gcgggcttcgagcaggactggctgccaccgctgcaggccatcgagcgcatcgaggtggtg
cgcgggccgatgtcgaccctgtacggctccgatgccatcggcggggtgatcaacgtgatt
acccgcaaagtggcggatacctggcacggcaacatccagctcgacaccgtactgcaggaa
gacagcgcctctggcgatagccgccaagcgaacttttatctcagcgggccgctggtgggt
gagcgcttagggttacagctctatggccgcacctccgagcgcgacgaagacgacatcgag
tacggctacgaagagaaaagcttgcagagcctcaccgcacgactgaacctggccgctagc
gataaccacgactttaccgccgaagcgggcattaccgagcaggatcgccgctcgttgatg
gggcgctccgggccggtggacggctgccgcggtggctgcaccgacagcattggcgaatac
accaacacccacgtggccgtgacccatagcggccgcttcgattggggcaccagcgagacc
ttcgtacagcgcgagcgcagcgaaaaccagtctcgggatatcgagattaccaacaccacc
gcgaaaaccagcgcgctgattcctctgggtatgcacatggtgaccgtcggcgcgagctgg
gaggaggagtcgctggacgatagctcgaccaaccaaatctccgaccggcagaccatcgaa
aacagccagtgggcgctgttcgtggaagatgagtggatgctgaccgacgcttgggcactg
accggcgggctgcgcttggacgatgacgacaactacggcagccacctgagcccgcgtctt
tatagcgtatggaacatgacgccggaatggaccctgaaaggcggcgtgtctaccggctac
cgctcgcccaacctgcgggaaatcaccccggattgggggcaggtcagccgcggcggtaat
atttatggcaacccggatctcgagccggaaacctcgctcaacaaagagatcgcgctgctt
tacggtaacgtcgcaggcctgaacggcagcctgacgctgttccacaacgacttcgaagac
aaaattacccgtatcgcctgcccgattgatatttgtaatgatggcgcgaatcagtttggc
agcgacccgacgtatcgcgtcaatatcgatgacgcggtgacccaaggggtcgaggccagc
ctgagcgcaccgttgagcgatacgctggcgctgaccgccagctacacgttcaccgattcc
gaacagaaaagcggtgagtacgccggcgagccgctgacccagctgccccgccatcaggtg
tcggcctcgctggattgggacgtgagcgcacggctcagccagtggaccaaagtgacctac
cggggagaagagagccagcccaccaccgggccctcgcaaagcgccatcatcgcgccgtct
tacaccttcgtggatgccggtatcggctatcagctcaacgatagcaccacggtgaatgcc
ggaatctacaacctgttcgacgagcgcatcacctacgacgagtatggttacgtggatgac
ggccgccgggtatggttgggcctgaacgtcgctttctaa
DBGET
integrated database retrieval system
