Vreelandella piezotolerans: GYM47_13385
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Entry
GYM47_13385 CDS
T07036
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpiz
Vreelandella piezotolerans
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpiz03016
]
GYM47_13385 (truD)
Enzymes [BR:
hpiz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GYM47_13385 (truD)
Transfer RNA biogenesis [BR:
hpiz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GYM47_13385 (truD)
Prokaryotic type
GYM47_13385 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QJA25019
LinkDB
All DBs
Position
complement(2933290..2934330)
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AA seq
346 aa
AA seq
DB search
MLDLPTWQRSLTPTFGVPAPGQYRARPEDFIVDEQLDFTPEEHGEHLWLRLEKRNQTTLD
VVKLLGRLCGVTPRDIGYSGMKDRVAVARQWLSVHLPGREAPEDLTATLGTAGVTVLAMA
RHPRKLKRGVHRTNHFTLRLSGDAVRPNDLLPRWEALCAQGVPNYFGHQRFGAGARNLQR
AAAVLAKGWRKRDDRQGMMLSTARSFLFNELLSARLADGNWCQPVAGDTLMLDGTQSVFT
IDDVEERLVARAAALDVHPTGVLWGVGGGAGGDAGRYEAQLAARHPALCAGLEQSGVKRG
QRALRARLIAPQATFEQESVLLSFALPRGSFATAVIGELIHHPDTA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatctccccacctggcagcgcagcttgacgccaacattcggcgtgcctgcgccc
ggccagtatcgcgctcggccggaagacttcatcgtcgatgaacagctcgactttaccccg
gaggaacacggcgagcatctgtggctacgccttgaaaagcgtaaccaaaccacgttagat
gtggtgaaactgctcggccgtttgtgcggtgtcaccccgcgcgatatcggctactccggt
atgaaggatcgcgtggccgttgcgcgccagtggctgagcgttcatctgcccggtcgcgaa
gcgcctgaggacttaactgccacgctcggcacagcgggcgtcacggtgctggccatggcg
cgtcatccgcgaaagttaaagcggggcgtgcaccgcacgaatcattttacgctgcgccta
agtggtgacgcggttcgcccaaacgatttattgccgcgttgggaagcgctctgcgcccaa
ggagtccccaactactttggccaccagcggtttggcgctggtgcgcgcaatctgcagcgc
gccgctgccgtactggccaaaggttggcgcaaacgcgatgatcgccaggggatgatgctt
tcgaccgcgcgcagctttctgttcaacgagctgctcagtgcccgactggcagacggtaac
tggtgccagcccgtcgcgggcgataccttgatgctcgatggcacgcaaagcgtgtttacc
atcgatgacgtcgaggagcgcttggtggcacgcgccgccgcgctggatgttcatcccaca
ggcgttttgtggggtgtgggcggcggggcaggcggtgacgcgggccgttacgaagcgcaa
ttggcggcacgccatcccgcactgtgcgccggcctcgagcagagcggcgtcaaacgtgga
cagcgtgcgctgcgtgcccggctgatcgcgcctcaggccaccttcgaacaagagtccgtg
ctactctcgttcgcgctgccccggggcagcttcgcgacggcggtgattggcgaattgatt
catcatcccgacacggcttga
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