Vreelandella piezotolerans: GYM47_14575
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Entry
GYM47_14575 CDS
T07036
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hpiz
Vreelandella piezotolerans
Pathway
hpiz03030
DNA replication
hpiz03410
Base excision repair
hpiz03420
Nucleotide excision repair
hpiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GYM47_14575 (polA)
03410 Base excision repair
GYM47_14575 (polA)
03420 Nucleotide excision repair
GYM47_14575 (polA)
03440 Homologous recombination
GYM47_14575 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpiz03032
]
GYM47_14575 (polA)
03400 DNA repair and recombination proteins [BR:
hpiz03400
]
GYM47_14575 (polA)
Enzymes [BR:
hpiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GYM47_14575 (polA)
DNA replication proteins [BR:
hpiz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GYM47_14575 (polA)
DNA repair and recombination proteins [BR:
hpiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GYM47_14575 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GYM47_14575 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QJA25234
LinkDB
All DBs
Position
complement(3187753..3190518)
Genome browser
AA seq
921 aa
AA seq
DB search
MARAPIVLVDGSSYLYRAFHALPPLTTSNGQPTGAVKGVLNMLKRLMKDYPDSPMAVVFD
APGKTFRDELYSDYKAHRPPMPDDLRSQIEPLHACVKALGLPLLCIEGVEADDVIGTLAH
HATQAGRDAVISTGDKDMAQLVNGHITLVNTMKEETLDEAGVEEKFGLPPALIIDFLALM
GDKVDNIPGVPGVGEKTAIGLLQGMGGGLDTIYGDLERVTTLGFRGAKTLPKKLEEHREQ
AFLSYQLATIKTDCDLPVGLDDLDIAHPDREALVELYKQMEFKQWLAELLEGNDEGVDDV
AGGEPVSEAADSATETAPTERHDHVITEQAELEAWLERLNEAERFCFDLETTSLNYMDAD
IVGVGIALKAGEAAYIPLAHDYLDAPAQLDRHTVLQALKPLLEDPAKTKIGQNLKYDISV
LANVDIHVVGPLADTMLASYVLNSTATRHDMDSLALKYLGEKTISFEEIAGKGAKQLTFN
QIALEQAAPYACEDVDITLRLQESLRPQVEREGRLAEVLDHLELPLINVLSRIERNGVAL
DAERLHEQSQQLEQRIRELESEAFELAGREFNLGSPKQLGQILFDEQKIPVIKKTPKGAP
STAEAVLEELALDYPLPKVIMQHRGLAKLKSTYTDKLPRLLNKTTGRVHTSYHQAVTATG
RLSSSDPNLQNIPIRTEEGRKIRQAFVARPGYRIVAADYSQIELRIMAHLSEDKGLLEAF
AEGRDIHTATAAEVFGTSLDKVSADQRRSAKAINFGLIYGMSAWGLSRQLHIDRNQAQTY
IDRYFDRYPGVARYMDRIRTQAAEDGFVETVMGRRLYLPEIHSQNRSRRQGAERTAINAP
MQGTAADIIKQAMIDVDTLLAEGEFDALMVMQVHDELVFEVAEAQVDRFIEQVQARMQAA
ASLNVPLIVEAQSGANWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgccccaatcgtgctcgtcgatggctcttcgtacctctaccgcgcgtttcat
gcgctgccgccgctaacgacctctaacggtcagccgaccggggccgtgaagggcgtactg
aacatgctcaaacggctgatgaaagactaccccgatagccccatggcggtggtgtttgac
gcgccgggtaaaaccttccgcgatgagctgtacagcgattacaaggcccatcgtccgccc
atgccggacgacctgcgcagccaaatcgaaccgctgcacgcctgtgtcaaagcactcggc
ctgccgctgctgtgcatcgaaggggtcgaggcggatgacgtgatcggcacgttggcgcac
cacgccactcaggctggccgcgacgcggtgatctccaccggcgataaggacatggcccaa
ctggtgaacggtcacatcacgctggtcaacaccatgaaagaggaaaccctcgatgaagcg
ggcgtggaggagaagtttggccttcctcccgcactgatcatcgacttcctcgcgctgatg
ggcgacaaggtggataacatccccggcgtgcctggggtgggcgaaaaaaccgccatcggt
ctgctgcaaggtatgggcggcggtttggacacgatttatggcgatttagaacgcgtgacc
accctcggtttccgtggcgcgaaaacgttacccaaaaaactggaagagcatcgggagcag
gcctttctctcttatcagctggccaccatcaaaaccgactgcgacttgcccgtgggattg
gatgatttggacattgcccacccggaccgcgaagcgctggtcgagctgtacaaacagatg
gagttcaaacagtggctcgccgagctgctggaaggtaacgacgaaggcgtggacgatgtg
gcaggcggcgagcccgtctcggaagcagccgacagcgcgacggagacggcgccgaccgag
cgccacgaccatgtgattaccgagcaggccgagctggaggcgtggctcgaacggctcaac
gaagccgaacgcttctgcttcgatctggaaaccaccagcctgaactatatggatgccgat
atcgtcggcgtggggattgcattgaaggcaggcgaggccgcctatattccgttggctcat
gattatctggacgccccggcccagttggaccgccacacggttctccaggcgttgaagccg
ctactggaagatcctgccaagaccaagattggccagaacctgaagtacgatatctccgtg
ctcgccaacgtggacattcatgtcgtggggccgctggcggacaccatgctggcctcctac
gtgctcaactccaccgccacgcgtcacgatatggactcgctggcgttgaagtacctgggt
gagaaaaccatttccttcgaagagatcgcaggcaaaggggccaagcagctcaccttcaac
cagatcgccctggagcaggcggcgccttacgcctgtgaggacgtcgacatcaccctgcgc
ctacaagagtcgttgcgcccgcaggtcgaacgggaagggcgtttggccgaggtgctcgac
cacctcgaactgccgctgatcaacgtgctgtcgcgcatcgagcgcaatggcgttgccctc
gatgcagagcgccttcacgaacagagccagcagctcgaacagcgtatccgtgagttagag
agcgaggccttcgagctggcgggccgcgagttcaatctgggctcgcccaagcagttaggg
cagattctgttcgacgagcagaaaatcccggtgatcaagaaaacgcccaaaggcgcgccc
tccacggcggaagcggtactcgaagagctggcgctagactacccgctgcctaaagtcatc
atgcagcaccgtggcctggccaagctgaaatccacctacaccgataagctaccgcgcctg
ctcaacaagacgacggggcgggttcacaccagctatcaccaggcggtcacggcgaccggg
cggctgtcgtcgtcggaccccaacctgcagaacattcccatccgcaccgaggaggggcgc
aagattcgccaggcgttcgtggcgcgccctggctaccgcatcgtcgcagcggactactcg
cagatcgagctgcgcatcatggcgcatctatctgaagacaaagggctgctagaggcgttt
gccgaagggcgcgatatccacaccgcgacggcggcggaagtcttcggcacctcgctggac
aaggtctccgccgaccagcggcgcagtgcgaaagccatcaactttggcttgatctacggc
atgagtgcctgggggctctctcgccagctgcacattgaccgtaaccaggcgcaaacctac
atcgaccgttacttcgaccgctaccccggtgtggcccgctatatggaccgtattcgtacc
caggcggcggaagatggcttcgtcgaaaccgtgatgggacggcggctttacctgccagag
atccactcacaaaaccgcagccgacgacaaggcgccgagcgtacggcgatcaacgcgccc
atgcagggcacggcggcggatatcatcaagcaggcgatgatcgacgtagatacgttgcta
gcggagggagagttcgatgcactgatggtcatgcaggtacacgatgaactggtgttcgaa
gtggccgaggcccaggtagatcgctttatcgagcaggtgcaggcgcgcatgcaggcggcg
gcatcgctcaacgtcccgctgattgtagaagcgcaaagcggcgcgaattgggatgaagct
cactaa
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