Vreelandella piezotolerans: GYM47_17150
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Entry
GYM47_17150 CDS
T07036
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hpiz
Vreelandella piezotolerans
Pathway
hpiz00300
Lysine biosynthesis
hpiz00470
D-Amino acid metabolism
hpiz01100
Metabolic pathways
hpiz01110
Biosynthesis of secondary metabolites
hpiz01120
Microbial metabolism in diverse environments
hpiz01230
Biosynthesis of amino acids
Module
hpiz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hpiz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GYM47_17150 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GYM47_17150 (dapF)
Enzymes [BR:
hpiz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GYM47_17150 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QJA25685
UniProt:
A0A6H1YBS9
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Position
complement(3740536..3741369)
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AA seq
277 aa
AA seq
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MLLHFTKMHGLGNDFMVVDLVTQRARLRDEQIRQLADRRFGIGFDQLLIVEPPRDPDMDF
RYRIYNADGSEVENCGNGARCFARFVRDQRLTHKHDIHVETAGGPLVLHVQHDGMVRVDM
GRPRFNPTALPFEAPGDQPLHELEADGETLQIGVVSMGNPHAVLQVENVDSAPVERLGPL
LEAHPRFPKRVNVGFMQVVSPSEIRLRVFERGSGETLACGTGACAAVASGIRQGLLKSPV
KVHLPGGQLSIEWPGPEASLVMVGPATRVFDGRVSLN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcacttcactaaaatgcacggtttgggcaacgacttcatggtggtggatctg
gtcacccagcgggcgcgcctgcgcgacgagcagattcgccagctggcggaccggcgcttc
ggcattggcttcgaccagctgctgatcgtcgaaccgccccgcgatccggacatggatttt
cgctaccgtatctacaacgccgacggtagcgaagtggagaactgtggcaacggcgcgcgc
tgctttgcccgcttcgtgcgcgaccagcgcttgacccacaagcatgacatccacgtcgaa
accgccggaggcccgctggtgctccacgtacagcacgacggcatggtacgcgtggacatg
ggcaggccgcgcttcaacccaaccgcgctgcctttcgaggcgccgggtgaccagccgctg
cacgagctggaagccgacggtgagacgctgcagattggtgtggtttccatgggcaacccc
catgcggttctccaggtcgagaatgtcgatagcgcgccggtggagcgcctggggccactg
ttggaggcgcacccgcgctttcccaagcgggtcaacgtgggcttcatgcaggtggtctcg
cccagcgaaattcgcctgcgggtattcgaacgaggcagcggtgaaaccctggcctgcggc
accggtgcctgtgcggcggtggccagcggtattcgtcagggtcttttgaagagtccggtg
aaagtgcatttgcccggcgggcaactcagcatcgagtggccgggccctgaggcgtcgctg
gtcatggtgggccccgccacgcgggtgtttgacggtcgggtatcactcaactaa
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