Helicobacter pylori J99: jhp_0322
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Entry
jhp_0322 CDS
T00020
Symbol
recJ
Name
(GenBank) putative SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hpj
Helicobacter pylori J99
Pathway
hpj03410
Base excision repair
hpj03430
Mismatch repair
hpj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
jhp_0322 (recJ)
03430 Mismatch repair
jhp_0322 (recJ)
03440 Homologous recombination
jhp_0322 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpj03400
]
jhp_0322 (recJ)
DNA repair and recombination proteins [BR:
hpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
jhp_0322 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
jhp_0322 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
jhp_0322 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Fe-S_biosyn
GLUCM-like_C
Motif
Other DBs
NCBI-ProteinID:
AAD05912
UniProt:
Q9ZMA0
LinkDB
All DBs
Position
complement(347685..349235)
Genome browser
AA seq
516 aa
AA seq
DB search
MKQKLKAQIKERVASIAYNEKGFPSPFLFKDLKKAALKIIEAMRANTEILVVGDYDADGV
ISSAIMAKFFKSLNYKHVRVAIPNRFMDGYGISKKFLEKHHAPLIITVDNGINAFEAAQF
CKEKNYTLIITDHHCLHHDEIPDAYAVINPKQPDCDFIQKEVCGALVAFYLCYGIHQLLG
KEKSHSSELLCLAGVATIADMMPLTFFNRFLVSKALYFLQKESLGAMGFLRQREVFRKRS
LKASDISFNIAPLINSAGRMQDAKMALDFLSANNFQDGCSLYERLKACNMKRKMIQQQVF
EEAFRHAMVGEKIIVAFKDNWHEGVLGIVASKLVEATQKPSLVFTFKEGVYKGSARSSPN
IDLIDALNGVSSLLLGYGGHRQACGLSVGKNNIVSLFETLENFDFKVLPFYETEPPLTLN
LKDIDRELLEIIEMGEPYGQENPEPLFQAKNLEVIEEKIIKESHQVLRFKDKECVKEAIY
FNADRFLKAGERVSVLFSVELDECSNEPKMFVKSLL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaagcttaaagctcaaatcaaagagcgagtggcttctatcgcctataatgaa
aaagggtttcctagcccctttttatttaaagacttgaaaaaagccgcgctcaaaatcata
gaagccatgcgcgcaaacacagaaattttagtggtgggcgattatgacgctgacggcgtg
attagctctgctatcatggcaaaattctttaaaagtttgaattacaagcatgttcgcgtt
gcaatccctaatcgcttcatggatggctatgggatttctaaaaagtttttagaaaaacac
cacgcccctttaatcatcacggtggataacgggatcaacgcctttgaagccgctcaattt
tgcaaggaaaaaaactacaccctaatcatcaccgatcaccattgcttacaccatgatgaa
atcccagacgcctatgcggtgatcaaccccaagcaaccggattgtgattttatccaaaag
gaagtgtgcggggcgttagtggcgttttatttgtgctatggaatccaccaacttttaggc
aaagaaaaaagccattctagtgagttgttgtgcttagcgggcgtggcaactatcgctgat
atgatgcctttgactttttttaaccgctttttggtttctaaagccttgtattttttgcaa
aaagaatccttaggggcgatggggtttttacgccaaagagaagtttttagaaaacgctct
ttgaaagcgagcgatatttcttttaatatcgcccctttaatcaactccgcagggcgcatg
caagacgctaaaatggctttagattttttaagcgcgaataattttcaagatggttgttct
ttgtatgaacgcttgaaagcatgcaatatgaagcgtaaaatgatccaacagcaggttttt
gaagaagcctttaggcatgcgatggttggagaaaaaatcatcgtcgcttttaaggataat
tggcatgaaggcgtgcttgggattgtggcttcaaagttagtggaagccacccaaaagcca
agcttggttttcacttttaaagaaggggtgtataaagggagtgctcgcagctctccaaat
attgacttgattgacgctttgaatggggtttcttctttattactcggctatggggggcat
aggcaagcgtgcgggttgagcgttggaaaaaacaatatcgtctcgctctttgaaacttta
gaaaattttgattttaaagtcttgcctttttatgaaacagaacctcctttaacgctcaat
ctaaaagacattgacagagagcttttagagattatagagatgggcgaaccttatgggcaa
gaaaaccctgagcctttattccaagcaaaaaatttagaagtcatagaagaaaaaatcatt
aaagaaagccaccaggttttgcgttttaaggataaagaatgcgtcaaagaagctatttat
tttaacgctgatcggtttttgaaagcgggcgaaagggtgagcgtgctttttagcgtggaa
ttagatgagtgttctaatgagcctaaaatgtttgttaaaagtttgttgtag
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integrated database retrieval system
