Helicobacter pylori J99: jhp_0392
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Entry
jhp_0392 CDS
T00020
Symbol
fliA
Name
(GenBank) RNA POLYMERASE SIGMA FACTOR (sigma 28)
KO
K02405
RNA polymerase sigma factor FliA
Organism
hpj
Helicobacter pylori J99
Pathway
hpj02020
Two-component system
hpj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hpj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
jhp_0392 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
jhp_0392 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpj03021
]
jhp_0392 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hpj02035
]
jhp_0392 (fliA)
Transcription machinery [BR:
hpj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
jhp_0392 (fliA)
Bacterial motility proteins [BR:
hpj02035
]
Flagellar system
Flagellar assembly proteins
Stator
jhp_0392 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
MarR
MarR_2
KORA
HTH_34
HTH_10
DUF3209
DUF4202
DUF7440
HsdM_N
Motif
Other DBs
NCBI-ProteinID:
AAD05973
UniProt:
Q9ZM31
LinkDB
All DBs
Position
420118..420885
Genome browser
AA seq
255 aa
AA seq
DB search
MILMMENRMPKEIQKTEASEKSIEKVLNAYDKQQHHHQDALAIQYLPAVRAMAFRLKERL
PSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDYLRSLDVISRSSRK
LIKSIDIEITKYLNEHGKEPSDEHLAEALGENIEKIREAKTASDIYALVPIDEQFNAIEQ
DEITQKIEAEELLEHIQKVLNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQIIK
EVIKKVRQSLGVNHG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgattttgatgatggaaaatagaatgcccaaagaaattcaaaaaactgaagcgagcgaa
aaaagtatagaaaaggttttgaacgcctacgacaagcaacaacaccaccatcaagacgcg
ctcgctatccagtatttaccagccgtgcgcgccatggcgtttcgtttaaaagagcgcttg
cctagctctattgattttaacgatctggtttctattggcactgaagaattgattaaatta
gccaggcgttatgagagcgcgttaaacgattctttttgggggtatgctaaaacgcgcgtc
aatggggcaatgttagattatttgcgttctttagatgtgatttctcgctctagcaggaag
ctcattaaaagcattgatattgaaatcaccaaataccttaatgagcatgggaaagagcct
agcgatgagcatttagcggaagctttaggcgagaatattgaaaagattagagaagccaaa
acggcttcagatatttatgcactagtgccaatagatgagcaattcaatgcgattgagcaa
gatgaaatcactcaaaagattgaagcagaagagttgttagagcatatccaaaaagtattg
aatcaaatgagcgaaagagagcaaatccttatccagctctattactttgaagagttgaat
ttgagcgagattaaagagattttaggcattactgaatcgcgcatttctcaaatcatcaaa
gaagtgattaaaaaggtgcgccaatccttaggagtgaatcatggctga
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integrated database retrieval system
