KEGG   Helicobacter pylori J99: jhp_0473
Entry
jhp_0473          CDS       T00020                                 
Symbol
virD4
Name
(GenBank) cag island protein, DNA transfer protein
  KO
K12090  cag pathogenicity island protein 5
Organism
hpj  Helicobacter pylori J99
Pathway
hpj05120  Epithelial cell signaling in Helicobacter pylori infection
Module
hpj_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hpj00001]
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05120 Epithelial cell signaling in Helicobacter pylori infection
    jhp_0473 (virD4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpj02044]
    jhp_0473 (virD4)
Secretion system [BR:hpj02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   jhp_0473 (virD4)
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AAD06056
UniProt: Q9ZLV3
LinkDB
Position
complement(514088..516334)
AA seq 748 aa
MEDFLYNTLYFIEDYKLVVIFSFIGLIALFFLYKFIKTQKKVFKDKANQPQKKKSFKEII
IDGLKERVKTFGFWLQAILLLSYSFITSGLFFLILLGNFYDDNRLPESDDDLFDIWVYAI
QDFPAYYFKALTFSSLKIYGFNISLVVYSSILCSYIFITFFVWFLKYLTRTRDIGANKKV
DDLFGSASWETEEKMIKAKLITPNNKKRAFDKREVIVGRRGLGDFIAYAGQAFIGLIAPT
RSGKGVGFIMPNMINYPQNIVVFDPKADTMETCGKIREKRFNQKVFIYEPFSLKTHRFNP
FAYVDFGNDVVLTEDILSQIDTRLKGHGMVASGGDFSTQIFGLAKLVFPERPNEKDPFFS
NQARNLFVINCNIYRDLMWTKKGLEFVKRKKIIMPETPTMFFIGSMASGINLIDEDTNME
KVVSLMEFFGGEEDKSGDNLRALSPATRNMWNNFKTMGGAKETYSSVQGVYTSAFAPYNN
AMIRNFTSANDFDFRRLRIDAVSIGVIANPKESTIVGPILELFFNVMIYSNLILPIHDPQ
CKRSCLMLMDEFTLCGYLETFVKAVGIMAEYNMRPAFVFQSKAQLENDPPLGYGRNGAKT
ILDNLSLNMYYGINNDNYYEHFEKLSKVLGKYTRQDVSRSIDDNTGKTNTSISNKERFLM
TPDELMTMGDELIILENTLKPIKCHKALYYDDPFFTDELIKVSPSLSKKYKLGKVPNQAT
FYDDLQAAKTRGELSYDKSLVPVGSSEL
NT seq 2247 nt   +upstreamnt  +downstreamnt
atggaagactttttgtataacaccttatatttcatagaggattataagttggttgttatt
tttagtttcatagggttaatagcgttatttttcctctacaaattcataaaaactcaaaaa
aaggtttttaaagataaagctaaccagcctcaaaagaaaaaaagctttaaagaaatcatt
atagatgggctgaaagaaagggttaaaacctttggcttttggttgcaagctatactatta
ctatcctattcttttatcacatcagggttatttttcttgattctcttaggtaatttttat
gatgataatagattgcctgagagcgatgatgatctttttgatatatgggtctatgcgata
caagattttcctgcatactattttaaggcactcacttttagctcgctcaagatttatggg
ttcaatatatccttagtcgtatatagttctattttatgctcttatatattcattaccttt
tttgtgtggttcttaaaatacttaactcggactagggacataggagcgaataaaaaagtt
gatgatctctttggtagcgcgagttgggaaactgaagagaaaatgatcaaagccaagctt
atcacacccaacaataaaaaacgcgcctttgacaaacgagaggttattgtaggcaggcgt
ggcttaggggattttatcgcttacgcaggacaggcgtttattggcttgattgctcctact
aggagcggtaagggtgtgggtttcatcatgcccaatatgatcaattaccctcaaaatatc
gttgtgtttgatcctaaggctgacactatggaaacttgcgggaaaatcagagaaaaacgc
ttcaaccaaaaagtgttcatctatgaacctttctccttaaaaacacaccgatttaatcct
ttcgcttatgtggattttggtaatgatgtggttttgactgaagacatactctctcaaatt
gacacacgcctaaaagggcatggcatggtggctagtggaggggatttttccactcaaatc
tttggattggctaagttggtgttccctgaaagacctaatgaaaaagatcctttttttagc
aatcaggcgcgaaacctttttgtcatcaattgcaatatttatagggatctcatgtggact
aaaaaggggcttgagtttgtcaaaagaaaaaaaatcatcatgcctgaaacccccacgatg
tttttcataggttctatggcaagcggtatcaacttgattgatgaagacacaaacatggaa
aaagtcgtgtctttaatggaattttttggaggtgaagaagataagagtggcgacaatcta
agagcgcttagtcctgccactagaaacatgtggaataacttcaagacaatgggtggcgct
aaagaaacttacagctcggttcaaggggtctatacatcagcgtttgcgccttacaataac
gccatgatcaggaatttcacgagcgctaatgattttgatttcaggcgtttaaggatcgat
gcagtgagtattggtgtgatcgctaatcctaaagaaagcactattgttggaccgatatta
gagctgtttttcaacgtgatgatttatagcaatttgattctgccaatccatgatccacaa
tgcaaaagaagctgcttgatgctcatggatgaatttacgctctgtggctatttagagacc
tttgttaaagcggtagggatcatggcagaatacaacatgcgccccgcttttgtgtttcaa
agtaaggcgcaattagaaaacgaccccccacttggttatggtaggaatggcgctaagact
attttagacaacctttctttgaatatgtattatgggatcaacaacgataactactatgaa
cattttgaaaagctttctaaagtgttagggaaatacacaaggcaagatgtgagccggagc
attgatgataatacgggtaagaccaacacttctatcagcaacaaggagcggtttttgatg
acccctgatgaattgatgactatgggcgatgagcttatcattttagaaaacacgctcaaa
cccatcaagtgccacaaggcgctttactatgatgatcccttcttcaccgatgagctcatt
aaggtgagtccaagcttgagcaagaaatacaaattggggaaagtgcctaatcaagcaaca
ttttatgatgacttgcaagccgctaaaaccagaggcgaattgagctatgataaatcttta
gtgcctgtgggttcaagcgaactgtga

DBGET integrated database retrieval system