Helicobacter pylori J99: jhp_0848
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Entry
jhp_0848 CDS
T00020
Symbol
hopC
Name
(GenBank) Outer membrane protein/porin
KO
K15843
outer membrane protein HopC/AlpA
Organism
hpj
Helicobacter pylori J99
Pathway
hpj05120
Epithelial cell signaling in Helicobacter pylori infection
Brite
KEGG Orthology (KO) [BR:
hpj00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05120 Epithelial cell signaling in Helicobacter pylori infection
jhp_0848 (hopC)
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Gene cluster
GFIT
Motif
Pfam:
HP_OMP
DUF6663
Motif
Other DBs
NCBI-ProteinID:
AAD06426
UniProt:
Q9ZKT7
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Position
931524..933086
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AA seq
520 aa
AA seq
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MIKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGAKSDELARELNADV
TNNILNNNTGGNVAGALSNAFSQYLYSLLGAYPTKLNGNDVSANALLSGAVGSGTCAAAG
TAGGTTLNTQSACTAAGYYWLPSLTDRILSTIGSQTNYGTNTNFPNMQQQLTYLNAGNVF
FNAMNKALEKNGTATANSTSSTSGATGSDGQTYSQQAIQYLQGQQNILNNAANLLKQDEL
LLEAFNSAVAANIGNKEFNSAAFTGLVQGIIDQSQLVYNELTKNTISGSAVNNAGINSNQ
ANAVQGRASQLPNALYNVQVTLDKINALNNQVRSMPYLPQFRAGNSRATNILNGFYTKVG
YKQFFGKKRNIGLRYYGFFSYNGASVGFRSTQNNVGLYTYGVGTDVLYNIFSRSYQNRSV
DMGFFSGIQLAGETFQSTLRDDPNVKLHGKINNTHFQFLFDFGMRMNFGKLDGKSNRHNQ
HTVEFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaagaatagaacgctgtttcttagtctagccctttgcgctagcataagttat
gccgaagatgatggagggtttttcaccgtcggttatcagcttgggcaggtcatgcaagat
gtccaaaacccaggcggcgctaaaagcgacgaactcgccagagagcttaacgctgatgta
acgaacaacattttaaacaacaacaccggaggcaatgtcgcaggggcgttgagtaacgct
ttctcccaatacctttattcgcttttaggggcgtatcccacgaaactcaatggtaacgac
gtgtctgcgaacgctcttttaagtggtgcggtaggcagtgggacttgcgcggctgcaggg
acggctggtggcacaactcttaacactcaaagcgcttgcaccgctgcgggctattactgg
ctccctagcttgactgataggattttaagcacgatcggcagccagactaactacggcacg
aacaccaatttccccaacatgcaacaacagctcacctacttgaatgcggggaatgtgttt
tttaatgcgatgaataaggctttagagaagaatgggactgctactgctaatagcactagt
agcactagcggtgcgactggttcagatggtcaaacttactctcaacaagctattcaatac
cttcaaggccaacaaaatatcttaaataacgcagcgaacttgctcaagcaagatgaattg
ctcctagaagctttcaactctgccgtagctgctaacattgggaataaggaattcaattca
gccgcttttacaggtttggtgcaaggcattattgatcaatctcaattggtttataacgag
ctcactaaaaacaccattagcgggagcgcggttaataacgctgggataaactccaaccaa
gctaacgctgtgcaagggcgtgctagtcagctccctaacgctctttataacgtgcaagta
actttggataaaatcaacgcgctcaacaatcaggtgagaagcatgccttacttgccccaa
ttcagagccgggaacagccgtgcaacgaatattttaaacgggttttacactaaagtgggc
tataagcaattcttcgggaagaaaaggaatatcggtttgcgctattatggtttcttttct
tataacggagcgagcgtgggctttagatccactcaaaataatgtagggttatacacttat
ggggtggggactgatgtgttgtataacatctttagccgctcctatcaaaaccgctctgtg
gatatgggcttttttagcggtatccaattagccggtgagaccttccaatccacgctcaga
gatgaccccaatgtgaaattgcatgggaaaatcaataacacgcacttccagttcctcttt
gacttcggtatgagaatgaacttcggtaagttggacgggaaatccaaccgccacaaccag
cacacggtggaatttggcgtagtagtgcctacgatttataacacttattacaaatcagca
gggactaccgtgaagtatttccgtccttatagcgtttattggtcttatgggtattcattc
taa
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