Helicobacter pylori J99: jhp_0931
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Entry
jhp_0931 CDS
T00020
Symbol
topA_3
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpj
Helicobacter pylori J99
Brite
KEGG Orthology (KO) [BR:
hpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpj03032
]
jhp_0931 (topA_3)
03400 DNA repair and recombination proteins [BR:
hpj03400
]
jhp_0931 (topA_3)
Enzymes [BR:
hpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
jhp_0931 (topA_3)
DNA replication proteins [BR:
hpj03032
]
Prokaryotic type
DNA Topoisomerases
jhp_0931 (topA_3)
DNA repair and recombination proteins [BR:
hpj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
jhp_0931 (topA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
DUF4364
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AAD06509
UniProt:
Q9ZKK4
LinkDB
All DBs
Position
1032846..1034906
Genome browser
AA seq
686 aa
AA seq
DB search
MNNSVIIIESPNKVAKIREITGAKVFATIGHFMQLKSYDENNGFKPTFDYDQEKKKHIFE
MIEACKNKKVYIATDPDREGYAIGYMFYQKIKNVASSIYRAEFFEITPSGINKGLQNALL
FENTNRQMYQSALARRVADMLLGFTLSPYLGKALGQMKGSSAGRVQTPCLKLIVDRDREI
EKFKALPENEKVSYQIQAKINDSANREVTIKHCDEKGEEIKFNDKEEALKLFESLKDNKA
CLLKDLKNSVVETKPKKPFITSTLLEKASSMLGLSISEVQSLAQNLFEAGLITYIRTDAE
SLSVEFLDETESFYAPIYKDLYLKREYKAGKQSQAEAHEAIRITHPHTTEDLESIVYNAN
ITNQDALKLYQLIFERTIESQGKNAIYDKQDLLFKIKNEYFKCSVKGLKSAGFLAMFSKK
ELENDESNDDKDNKEKEQNAQFNLKIDDVLSLNDLVLSTIKRNAPSAYKEADFVKLLENK
GIGRPSTYASYLPTLVKREYISISQDKKHIITPTHKGKRVVEVFENAYQFIIDLTYTKQM
EEVLDEIVENKSSYVDFISNLNSKCPKIEKLERNDDEIKPSSEGQITYIENILRDLQLNL
SEEFKNYKEDNRVAKAFLDRYIKEHEFFKKNNKKASSSNNDENRPATPKQISFAEILAKK
HNVKLPKGFKYSMKVCGDFINEYHKK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaataacagcgtcatcattattgaaagtcctaataaggtagctaagattagagaaatc
acaggagctaaggtctttgctaccatagggcattttatgcaacttaaaagctatgatgaa
aataatggctttaagccgacttttgattatgaccaagaaaagaaaaaacatatttttgag
atgatagaggcgtgtaaaaacaaaaaggtttacatcgccactgaccctgatagagagggc
tatgctataggctatatgttttatcaaaaaatcaaaaatgtagctagttctatttatagg
gcggagttttttgaaatcacaccaagtgggattaacaagggcttacaaaacgccctttta
tttgaaaacaccaataggcaaatgtatcaaagcgctttagcaagacgagttgcagatatg
ctcttaggttttacgctatccccttatttaggtaaggctttaggacaaatgaaaggtagt
agtgctgggcgagtgcaaaccccttgtttaaaacttattgtagatagagacagagagatt
gaaaaatttaaggctttacctgaaaatgagaaagtaagctatcaaattcaagctaagatt
aacgatagtgctaacagagaagtaactatcaagcattgtgatgaaaagggcgaagagatt
aaattcaatgataaagaagaggctttaaaactctttgagagcttaaaggataataaagct
tgtcttttaaaggatttaaaaaactctgttgtagagactaaacctaaaaagccctttatc
acttctacgcttttagaaaaagcaagttctatgcttggtttaagtattagcgaagtgcaa
tcactagctcaaaatctctttgaggctggactgattacttacattaggacagatgcggaa
agtttgagcgtggagtttttagatgagacagagagcttttatgcacctatttataaggac
ttgtatttaaaaagagaatacaaggctggcaagcaaagccaagcagaagcccatgaagca
attcgcatcacacacccccatactactgaagatttagaaagcatagtctataatgctaat
attactaatcaagacgctttaaaactctatcaactcatttttgaaaggactattgaaagt
caaggcaagaatgccatttatgacaagcaagatttgctctttaaaatcaaaaacgagtat
tttaaatgttctgtaaagggtttaaaaagtgctggatttttagcaatgttttctaaaaaa
gagctagaaaatgatgaaagtaatgatgataaagacaataaagaaaaagaacaaaacgca
caatttaatctaaaaattgatgatgtgttaagtctaaatgacttagttttatccaccatt
aaaagaaatgccccaagtgcttataaagaggcagattttgtcaagcttttagaaaataaa
ggcataggcagacctagcacttatgcgagctatttgcctacgcttgtaaaaagagaatat
atcagcattagccaagataaaaaacacattattacgcctacacataagggtaaaagagtg
gtagaagtgtttgaaaatgcttatcaattcattattgatttgacctatactaaacaaatg
gaagaagtgctagatgagattgtagaaaataaaagctcttatgtggattttatcagcaat
ttaaattctaaatgccctaagattgaaaagctagaaagaaatgatgatgagataaaacct
agcagtgaaggacaaattacttatatagaaaatattttaagagatttgcaattaaattta
agcgaagagtttaaaaactacaaagaagacaacagagtggctaaggcgtttttagaccga
tacattaaagagcatgagttttttaagaaaaacaacaaaaaggctagtagctctaataat
gatgaaaatagacccgctacgcctaaacaaattagctttgctgagatattagctaaaaag
cataatgtcaagctccccaaaggatttaaatatagtatgaaagtgtgtggggattttatc
aatgagtatcataagaagtag
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