Helicobacter pylori J99: jhp_1371
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Entry
jhp_1371 CDS
T00020
Symbol
rep
Name
(GenBank) putative ATP-DEPENDENT DNA HELICASE
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpj
Helicobacter pylori J99
Pathway
hpj03420
Nucleotide excision repair
hpj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
jhp_1371 (rep)
03430 Mismatch repair
jhp_1371 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpj03400
]
jhp_1371 (rep)
Enzymes [BR:
hpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
jhp_1371 (rep)
DNA repair and recombination proteins [BR:
hpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
jhp_1371 (rep)
MMR (mismatch excision repair)
Other MMR factors
jhp_1371 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AAD06960
UniProt:
Q9ZJE1
LinkDB
All DBs
Position
complement(1501359..1503404)
Genome browser
AA seq
681 aa
AA seq
DB search
MGFEKSILDNLNGAQKIAACHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLT
LTFTNKASKEMQERALKLLKNQALIPPLLCTFHRFGLLFLRQHMNLLKRACDFSVLDSDE
VKTLCKQLKISNFRASISQIKNGMMDLSVQDSECYKAYELYQNALKKDNLVDFDDLLCLS
LKILQDNEKLAKETSERYHYIMVDEYQDTNALQLEFLKQLSFTHHNLCVVGDDDQSIYGF
RGADISNILNFSKHFKGAKIVKLETNYRSSAEILACANSLISHNQHRHIKTLQSFKGSHK
SVICKEYPTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRL
IGAVSFYERAEVKDALALMHVVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEEGLN
LEEALKIGAFKDKLNPKNEYALKKFTAMIGRLREAFEISVEKFCERFLEETNLLKSYEKE
DNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESALDVHNTENAQKVSCMSVHMSKGL
EFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEELQLSYVKERSYFGRKIS
CSPSVFLEEAQLLQQDKPPKQNHQKDTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKIN
CGGNVYDKISEKFVEKVDNEF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgaaaaaagcattttagacaatttgaacggagcgcaaaaaattgccgcatgc
cacattcaagggcctttattgattttagcgggagctgggagcggtaagactaagacttta
acgagccgtttagcgtatttgattggcgcttgtggcgtgcctagcgaaaacactttaacg
ctcactttcaccaataaagcgagtaaagaaatgcaagaaagggctttgaaattgttgaaa
aaccaagcccttatcccccccttgctttgcactttccatcgttttggtttgctgttttta
aggcaacacatgaatcttttaaaaagggcgtgcgatttttcggtgctagatagcgatgaa
gtgaaaacgctctgcaaacagctcaaaatttcaaatttcagggcgagcatttctcaaatc
aaaaacggcatgatggatttgagcgtgcaagatagcgaatgttacaaagcgtatgagctt
tatcaaaacgcgctcaaaaaagacaatttagtggattttgacgatttgctttgtttgagc
cttaagattttacaagataatgaaaaactcgccaaagagaccagcgaacgctaccattac
attatggtagatgagtatcaagacacgaacgccctgcaactggaatttttaaaacaattg
agtttcacgcaccataatttgtgcgtggtgggcgatgacgatcagagcatttatgggttt
aggggggctgatatttctaacattttaaatttttccaagcattttaaaggggctaaaata
gtgaaattagagaccaactaccgctctagcgctgaaatcttagcgtgcgctaattccctg
atcagccataaccaacaccgccacattaaaacgcttcaaagtttcaaaggttcgcacaaa
agcgtgatttgtaaagaataccccacgcaaaaagaagagagcctggatgtggcttatcag
atcaaagcccttttaaagaagggcgagaatttagaaaatatcgctattttgtatcgttta
aatgggcttagccgcagcattgaagagagcttgaacgctttgaatatcccttataggctc
attggtgcggtgagtttctatgaaagagccgaggttaaagacgctttggcactcatgcat
gtggtggcgaaaaaagacgatcgcttttttattaaacgcgttttaaacaagcccccaaga
ggccttggcaagatcactcaagaatggattttttctcttttagatgaagagggtttgaat
ttagaagaagcgctaaaaattggggcgtttaaagacaaactcaaccctaaaaacgaatac
gctttaaagaaattcaccgctatgatagggcgtttgagggaggcttttgaaatttcagta
gagaagttttgcgagcggtttttagaagagactaaccttttaaaaagctatgaaaaagaa
gacaattacgaagaaagagagggctttgttaaagagcttttaagtttagtgaaagagcat
tttaaaactaaccccacgcattctttactggattttttgaatgaaagcgcactggatgtc
cataatacagaaaacgcgcaaaaagtgagttgcatgagcgtgcatatgagtaagggctta
gagtttaagcatgtgtttgtgatcgggttagaagaggggtttttcccgcatagggggttc
aatcaagaaagcgatttggaagaagaaaggcgcttggcttacgtggcgatcactagggct
aaagaagaattacaactttcttatgtcaaagagcgttcgtattttgggaggaaaatttct
tgctcgccctctgtgtttttagaagaagcccagttgctccaacaagacaagcctcctaaa
caaaatcaccaaaaagatacgcccattaaagtgggggatttgatcaaacataagattttt
ggcaccgggagggttttaggcgtagaaaaaggcttgagcggtttgtgcttgaaaatcaat
tgcggagggaatgtctatgataaaatttcagaaaaatttgtagaaaaagtggataacgag
ttttga
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