KEGG   Helicobacter pylori J99: jhp_1424
Entry
jhp_1424          CDS       T00020                                 
Symbol
hsdR_3
Name
(GenBank) TYPE I RESTRICTION ENZYME (RESTRICTION SUBUNIT)
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hpj  Helicobacter pylori J99
Brite
KEGG Orthology (KO) [BR:hpj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hpj02048]
    jhp_1424 (hsdR_3)
Enzymes [BR:hpj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     jhp_1424 (hsdR_3)
Prokaryotic defense system [BR:hpj02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   jhp_1424 (hsdR_3)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD AcylCoA_dehyd_C FANCI_S2
Other DBs
NCBI-ProteinID: AAD07007
UniProt: Q9ZJ90
LinkDB
Position
1567305..1570280
AA seq 991 aa
MKTEREVQNQVIETFKAMGYAYLGDLTKSDNENINKESLKAWLIKNQKIEPERWHKIEQE
IHTALKNDLYEANQKFYELLIYGVKTKISLNENTQTHWLIDWKDVSKNEFSVAEEVSAKG
PNMKRPDIVLYVNGIALGVLELKKSSVSVESGIRQNLDNQKKEFIRDFFKTIQLVMAGNE
SQGLKYGVIETEEKYYLSWKEEGVQKNLFETIECFLDKKRFLEFIHDFLIFDKGQKKCAR
FHQYFAIKKTQEFIQRKEGGIIWHTQGSGKSLTMVWLTRWIRRNIKQARVLIVTDRRELD
AQIQGVFQGIGEKIYRADSKKDLLSVLFENKKFLVGSLVHKFDDNDLEDLKKQPVLKEWI
VLVDECHRTQSGKLHKAMKSLLPNAIFIAFSGTPLLKQDKKTSQEVFGDYIHCYKFNEAV
SDKVVLDLNYEARSVEQYVSSPEKLDEYFELKTQNLNEAAKTELKKKWVNLQKVFSTKDR
LEHIVQDIVLDMAKLPRLSNGKGNAMLVAESVYNACRYFELFLETELKDKVAVITSYEPN
IADLKDCGSNESEESYKYRAYCKMLQNFFNEKDEKKALNKIKEFEEEVKKRFINEPARMK
LLIVVDKLLTGFDAPSLTYLYIDKRMQDHGLFQAVCRVNRLDGEDKDFGCIIDYSDLFDS
LQEAHSDYTNGAFENYEREDIQGLISDKSQKIKKKLEETRDQLKSLCESVKEPKDEEDYI
AYFCGDNLEKNAQKRRLFYQLVGAFLRMFVELNNLEKPIYSKEETQQIKQEAGFYRHLQK
VVGLSSGDSVDLKSYNEDMRRILDAYIKTTDSEVLFQIEDQGLCEVLAQMDINDFNKALS
QVFKNESSMAESIANNTRKRIIEKEASDPKYYEKLSSLLNDLILQFREKKLTYLEYLQQI
QDLAKKVIDKEDRNYPKKINTKALKTLYDNLDENEALALETDACIRGNKKDGWVGHNQKE
KNLKIALRKIINDEVLLENIFNLAKHIEEYH
NT seq 2976 nt   +upstreamnt  +downstreamnt
atgaaaacagaaagagaagttcaaaatcaagtcatagaaacttttaaagcaatgggctat
gcgtatttgggggatttaacaaagagcgataatgaaaatatcaataaagaaagcctgaaa
gcatggctaattaaaaatcaaaaaattgagcctgaaaggtggcataaaattgagcaggaa
atccataccgctttaaaaaacgatttatacgaagcgaatcaaaaattctacgagcttttg
atttatggcgtgaaaactaaaataagcctgaatgaaaacactcaaacgcattggctcatt
gattggaaagacgtttctaagaatgaatttagcgtggctgaagaagtgagcgctaaaggg
ccaaacatgaaacggccggacatcgtgctttacgttaatgggatcgctttaggggtgcta
gaattgaaaaaatccagcgtgagcgtggaaagcggtattaggcaaaatttagacaaccaa
aagaaggaatttattagagatttttttaaaacgatccaattggttatggcgggtaatgaa
agtcaagggctaaaatatggcgtcatagaaactgaagaaaaatactacctttcttggaaa
gaagagggcgttcaaaaaaatttgtttgagacgattgagtgttttttggataaaaaaagg
tttttagaatttatccatgattttttgatttttgataaggggcaaaagaaatgcgccaga
ttccatcagtattttgcaattaagaaaacgcaagaatttatccaaagaaaagaagggggg
attatctggcacacgcaaggcagcggtaagagcctgactatggtgtggcttactagatgg
ataagaagaaatatcaaacaagcgagggttttaatcgttacggacaggagggaattagac
gctcaaatccaaggcgtgtttcagggaataggcgagaagatttatcgcgccgacagcaag
aaggatttattgagcgtgctgtttgaaaataagaaatttttagttggatcgcttgtgcat
aaatttgatgacaacgacttagaagatttaaaaaaacaacctgttttaaaggaatggatt
gttttagtggatgaatgccacagaacccaaagcggtaaattgcataaagccatgaaaagc
ctgctccctaatgcgatttttatcgcctttagcggcacgcctttattgaagcaagataaa
aagacaagccaggaagtgtttggggattatatccattgctataaatttaatgaagccgtt
agcgataaagtggtgttagatttaaattatgaagccaggagcgtggaacaatatgtcagt
agccctgaaaagctggacgaatattttgaattaaaaacccaaaacttgaatgaggcggct
aaaacagagcttaaaaagaaatgggttaatttgcaaaaagttttttccactaaagacaga
ttggaacatattgtgcaagatattgtattggatatggcaaaactcccacgattaagcaat
ggaaaggggaacgccatgctggtggctgaaagcgtgtataacgcatgccggtattttgaa
ctctttttagaaacagaattaaaggataaggtggctgtgatcacaagctatgaacccaat
atcgctgatcttaaagattgcgggagtaatgagagcgaagagagttacaaataccgcgct
tattgcaaaatgctgcaaaacttttttaatgaaaaagatgagaaaaaagcccttaataaa
atcaaagagtttgaagaagaagtcaaaaagcgtttcattaatgagcctgctagaatgaag
ctattgatcgtggtggataagctattgaccggttttgatgcgccaagcctcacttattta
tacattgataagagaatgcaagatcatgggctttttcaagcggtgtgcagggtgaataga
ctggatggtgaggataaggattttggctgcatcatagactatagcgatttgtttgatagc
ttgcaagaagcgcacagcgattatactaatggggcgtttgaaaactatgaaagagaagac
attcaagggctgatctctgacaaatcccaaaagattaagaaaaaattagaagaaactaga
gatcagttaaaatcgctttgtgaaagcgtgaaagagccaaaagatgaagaggattatatc
gcttatttttgtggggataatttagaaaaaaacgctcaaaaaaggcggttgttttaccag
cttgttggcgcgtttttaagaatgtttgtggaattgaataacttagaaaagcccatttat
tctaaagaagaaacgcaacaaatcaaacaagaagcgggattttacaggcatttacaaaag
gtggttggcttgagtagtggggatagcgtggatttaaaaagctacaatgaagacatgcgc
cggatcttagacgcttacattaaaaccacggatagcgaggtgttattccaaatagaagat
caagggctgtgcgaagttttagcccaaatggatattaatgattttaataaggcgttatct
caagtatttaaaaatgaaagctctatggcagaaagcatcgctaacaacaccagaaaacgc
attatagaaaaagaagcgagcgaccctaagtattacgaaaaattatcttcgcttttaaac
gatttgattctccaatttagagaaaagaaattaacctatttagaatacttgcaacaaatc
caggacctagccaaaaaagttattgataaagaagatagaaattaccctaaaaagatcaac
actaaggctttaaaaaccctctatgataatttagatgaaaatgaagccttagccctagaa
acagacgcatgcattaggggtaataaaaaagatggttgggtggggcataatcaaaaagaa
aaaaaccttaaaatcgctttaagaaaaatcataaacgatgaggttttgttagaaaatatc
tttaatttagccaaacacatagaggagtatcactaa

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