Helicobacter pylori J99: jhp_1480
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Entry
jhp_1480 CDS
T00020
Symbol
dniR
Name
(GenBank) putative REGULATORY PROTEIN
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hpj
Helicobacter pylori J99
Brite
KEGG Orthology (KO) [BR:
hpj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpj01011
]
jhp_1480 (dniR)
Enzymes [BR:
hpj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
jhp_1480 (dniR)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpj01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
jhp_1480 (dniR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
SLT_2
HTH_Mga
DUF928
Motif
Other DBs
NCBI-ProteinID:
AAD07052
UniProt:
Q9ZJ37
LinkDB
All DBs
Position
complement(1628738..1629862)
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AA seq
374 aa
AA seq
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MPKRMKCFSQKWLVFFVTHWLLLASLSHAKMAFESNIDTKALEAFGVNASFLSQMPGALK
KVNKEEEWKKLVKRFDVNYQFIPIIKNMLIGASVPQEFLFLAMAESKFSSRAYSRKKAVG
IWQFMPSTAKELGLKVNHYIDERRDPIKSTQAAIAYLKRLYKQTGEWYLVAMAYNYGLRK
VQNAIKAAGTSDIKVLLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGAR
VSLVGVPFKRHTSLVQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFK
QRQLKQNKNAQANPKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIHQRL
IIPTNKKLLATREF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagaatgaagtgttttagtcaaaaatggttggttttttttgttacccattgg
cttttgttggcttctttaagtcatgcgaagatggcttttgaatccaatattgacaccaaa
gcgttagaggcttttggggtcaatgcgagctttttatcccaaatgccaggcgctttaaaa
aaggtgaataaggaagaggaatggaaaaagttagtcaaaagatttgacgtgaattaccaa
ttcatccctatcattaaaaacatgctcataggagcgagcgtgccgcaagaatttttgttt
ttagccatggccgagtctaagttttcatcaagggcttatagcaggaaaaaagcggtaggg
atttggcaattcatgccaagcacggccaaagagttagggcttaaggtcaatcattacatt
gatgaaagaagagatcccattaaaagcactcaagcggcgatcgcttatttgaaacggctc
tacaagcaaaccggtgagtggtatttggtcgctatggcgtataattacggcttacgcaag
gttcaaaacgctattaaagccgccggcacttcagacattaaagtcttgctagatgaagat
aaaaaatacctccctaaagaaacacgagagtatatccgctccattctaagcctggcgttg
aaattcaacagcctagacaatctcaaagataaagagtatttgctcaatcgtggggcgagg
gtgagtttagtgggcgtcccgtttaaaagacacacttctttagtccaggtggccaaaaat
ttgaatttgagtttagaaaccttaaaatcttacaaccaccaattccgctataacattctg
ccctctaaagaccccacctacaccatttatatcccttatgaaaaactcgcccttttcaaa
caacgccaactcaaacaaaataaaaacgctcaagctaatcctaaaagccctttcatcacc
catgtggtcttgcctaaagaaaccttatcttctatcgctaaacgctatcaagtcagcatt
tccagtatccaattagccaataacctcaaagattctaatatctttatccaccagcgctta
atcatccccactaacaaaaaattactcgctacaagggaattttaa
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