Halanaerobium praevalens: Hprae_0569
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Entry
Hprae_0569 CDS
T01941
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K02405
RNA polymerase sigma factor FliA
Organism
hpk
Halanaerobium praevalens
Pathway
hpk02020
Two-component system
hpk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hpk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hprae_0569
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Hprae_0569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpk03021
]
Hprae_0569
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hpk02035
]
Hprae_0569
Transcription machinery [BR:
hpk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Hprae_0569
Bacterial motility proteins [BR:
hpk02035
]
Flagellar system
Flagellar assembly proteins
Stator
Hprae_0569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_3
MarR_2
UPF0122
HTH_24
GerE
DUF7343
Motif
Other DBs
NCBI-ProteinID:
ADO76723
UniProt:
E3DPP8
LinkDB
All DBs
Position
636679..637434
Genome browser
AA seq
251 aa
AA seq
DB search
MALDKSLWKKYKVDDNQQAREEIILKNLGLVRYAVGRINIMLPEHIEDQDLESYGIIGLI
EAIENFNYQRGVKFSTFALPRIKGEIYDYLRSKDWLPDNMRRELKKVDEQKRSYKAKTGK
KPDQKELSKLTGIKKSRLEKIERHSQLANWISLSHDFDGTELIELVAADFKQAVDRLTEK
EAVDFLAKKIDLLSEKEKLVLSLYYYEELTQVEIAEIIELSAARVSQIHGRAIRRLRGML
SRAKEYFFNER
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggctttagataaatcgctctggaaaaaatataaagttgatgataatcagcaagctaga
gaagagattatcttaaaaaatcttggtttagttagatatgcagttggtagaattaacatt
atgctgccagagcatatagaagatcaagatctagaaagttatggaattattggactaatt
gaagcaatagagaactttaattaccaaagaggggttaagttttccacttttgcccttccc
agaattaaaggagaaatttatgattatttaagaagtaaagattggctgcctgacaatatg
cggagggagctaaaaaaagtagatgagcaaaagagaagctataaagctaaaactggtaaa
aaaccagatcaaaaagaattatcaaaattaacaggtatcaaaaaatcaaggttagaaaaa
atagagagacacagccaacttgcaaattggatttcactttcacatgattttgatggaaca
gaattaatagagttagttgctgctgattttaaacaagctgtagatagattaactgaaaaa
gaagctgttgattttttagctaaaaaaattgatttactttctgaaaaagaaaaacttgtt
ttaagtttatattattatgaagaattaactcaagttgaaatagcagagataatagaatta
tcagctgctagagtttctcaaattcatggtcgagctattcgtcgtttaagaggaatgcta
agtagagccaaagaatatttttttaatgagaggtag
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