Halanaerobium praevalens: Hprae_1086
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Entry
Hprae_1086 CDS
T01941
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hpk
Halanaerobium praevalens
Pathway
hpk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Hprae_1086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpk03019
]
Hprae_1086
03009 Ribosome biogenesis [BR:
hpk03009
]
Hprae_1086
Enzymes [BR:
hpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Hprae_1086
Messenger RNA biogenesis [BR:
hpk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Hprae_1086
Ribosome biogenesis [BR:
hpk03009
]
Prokaryotic type
rRNA helicases
Hprae_1086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
YebO
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADO77237
UniProt:
E3DLP0
LinkDB
All DBs
Position
1203597..1205186
Genome browser
AA seq
529 aa
AA seq
DB search
MQKIKFNELNVSDEILKAVEEMGFEETTPIQTNAIPAVLNGQDIVGQAQTGTGKTAAFGI
PLLEEMDSENKNPQAIILCPTRELAIQVSEELKRLAKYKRRIYTLPVYGGQSIGRQIKAL
KKGVQIVIGTPGRVMDHIRRKTLKLDNINYFVLDEADVMLDMGFIDDIETVLRDIPDDRQ
TLFFSATIPKSIKRLSKKYQKNSKFLRVAHENLTVPSIDQYYYEIRRNDKLKALTRIMDL
SNPELAIVFCNTRKMVDELNIKLQARGYLSDAIHGGLNQNQRDRVMKKFRSGIIEVLVAT
DVAARGIDVDDVEAVFNYDLPQDTDYYVHRIGRTGRAGKSGEAHNFVVGKDIYKLRDIQK
YTKSKIKRAQIPSQDDIQAAKFEQFSQELSAYMDSADLGKYIDLIEELIDEQYSAIEIAA
ALMKKSVDKKEEAQEPENSGQNFGDTGAEPGMVRLFINIGKKDRVSPRHIVGAIAGETGM
PGGLIGAIDIYDNFTFVEVPREKGHEVLQIMKDNYIKGTKINIEAARSK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaagattaaatttaatgaattaaacgtctccgatgaaattttaaaagcagttgaa
gaaatgggttttgaagaaacaactcctattcagacaaatgctattccagcagtgcttaat
ggtcaagatattgtaggacaagctcaaacaggtacaggtaaaacagccgcttttgggatc
cctcttttagaagaaatggattctgaaaataaaaatccacaggctattatactttgcccc
acaagagaacttgccattcaggtttctgaggaattaaaaagattggctaaatataaaaga
agaatttatactctcccagtttatggaggtcaatcaattggtagacaaataaaagcttta
aaaaagggtgttcaaatcgtaattggtacacctggtagagtaatggatcatattcgtcgt
aaaactttaaaacttgataatataaattattttgtacttgatgaagcagatgtaatgctt
gatatgggttttattgatgatatagaaactgtgctaagagatattcctgatgatagacaa
actctcttcttctcagctactattcctaaatcaattaaaaggttaagtaaaaagtatcag
aaaaactcaaagtttttaagagtagcgcatgaaaatcttactgttccttctattgatcag
tattactatgaaattagaagaaatgataagttaaaagctttaactagaattatggactta
agtaatcccgaattagccattgttttttgtaatactagaaaaatggttgatgaattgaat
attaaacttcaagctcgtggctatctttctgatgctatccatggtggtttaaatcaaaac
caacgtgatcgcgtgatgaagaaattcagatcaggaatcatcgaagtcttagtagctact
gatgtggcagctagaggtattgatgttgatgatgttgaagcagtatttaactatgatcta
ccgcaggatactgactattatgtacacagaatcggtcgtacaggtagagctggcaaaagt
ggtgaagctcataactttgtagttggaaaagatatctataaattaagagatattcaaaaa
tatactaaatccaaaataaaaagagctcaaatccctagtcaagatgatattcaggcagct
aaatttgaacaatttagtcaagaattaagtgcttatatggattctgctgatttaggtaaa
tatattgatctaattgaagaactaattgatgagcagtattctgctatagaaattgctgct
gctttaatgaaaaaatctgtagataaaaaagaggaagcacaagaaccagaaaattctggt
caaaactttggtgatactggagcagagcctggaatggtaagattatttattaatattggt
aaaaaagatagagtatctcctcgccacattgtaggagctattgctggtgaaacaggaatg
cctggtggcttaattggagcaattgatatttatgacaactttacctttgttgaagttcct
agagaaaaaggtcatgaagtactacaaatcatgaaagataattatattaaaggaactaaa
atcaatattgaagcagctagatctaaataa
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