Halanaerobium praevalens: Hprae_1103
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Entry
Hprae_1103 CDS
T01941
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
hpk
Halanaerobium praevalens
Pathway
hpk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hpk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Hprae_1103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpk03021
]
Hprae_1103
Transcription machinery [BR:
hpk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Hprae_1103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ATP-cone
HTH_10
DrsE_2
FlgI
FAM176
Motif
Other DBs
NCBI-ProteinID:
ADO77254
UniProt:
E3DLQ7
LinkDB
All DBs
Position
1230324..1231256
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AA seq
310 aa
AA seq
DB search
MVKKANNEDNDNQNENTEEEEQDLDLSIPDGAGIDDSVRVYLKEMGKVDLLDKEEEVELA
KRIEQGDQRAREQLTEANLRLVVSIAKKYIGQGMSFLDLIQEGNKGLMKAVEKFDYTKGY
KFSTYATWWIRQSITRALADQARTIRIPVHMVETMNKLRRIEKRLKKDLEREPTLEEIGE
EMNMEPEKVLEIQKLAMNQQPTSLDTPIGEEKDSHLKDFIEDQDAPAPEMLASSELLKDQ
LETVLDTLTDREKRIIKLRFGLEDGRQRTLKEVGSQFGVTRERIRQIQAKALRKLRHPTR
SKELRGYLNN
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaaaagctaataatgaagataatgataaccaaaatgaaaatactgaagaagaa
gaacaggatttagatctttccattcctgatggagctggtatcgatgattcagtccgtgtt
tatttaaaagaaatgggaaaagttgatctgcttgacaaagaagaagaagtagaacttgct
aaaagaatagaacaaggtgatcaaagagctagagagcaattaacagaagcaaatttaaga
cttgtggtaagtattgctaaaaaatatataggtcagggcatgtcttttcttgatttaatt
caagagggaaataaaggtttaatgaaagcagtagagaagtttgattatactaaaggttat
aagtttagtacctatgcaacctggtggattagacaatcaattactagagctttagctgat
caagctcgaacaattagaattccagtgcatatggtagaaaccatgaataagttgagaaga
attgaaaaaagattgaaaaaagatttagaaagagaaccaactttagaagaaattggcgaa
gaaatgaatatggaacctgaaaaagtattagaaattcaaaaacttgctatgaaccaacag
cctacttctttagatactcctattggtgaagaaaaagatagccatttaaaagattttata
gaagatcaagatgcaccggctcctgaaatgttagcctcatctgaacttttaaaagatcaa
ttagaaacagtacttgatactttaacagatagagaaaaaagaattattaaattaagattt
ggacttgaggatggtcgtcagagaactttaaaggaagttggaagccagtttggagttact
agagaaagaattagacaaatccaagctaaggccttaagaaagctaagacatcctaccaga
agtaaagaattaagaggctatttaaataactaa
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