Halanaerobium praevalens: Hprae_1470
Help
Entry
Hprae_1470 CDS
T01941
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hpk
Halanaerobium praevalens
Pathway
hpk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hprae_1470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpk03400
]
Hprae_1470
Enzymes [BR:
hpk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Hprae_1470
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Hprae_1470
DNA repair and recombination proteins [BR:
hpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Hprae_1470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
DZR
Zn_ribbon_19
RNHCP
C1_2
Motif
Other DBs
NCBI-ProteinID:
ADO77597
UniProt:
E3DNP7
LinkDB
All DBs
Position
complement(1621269..1622099)
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVETVVKGLGPLIRNKKVTEVEIREKNMIAYPKNNIKAFKKDLLGAKIEKVKRRG
KYIIIELNNYKNLVIHLRMTGKLLVKEVKDFRDKHTHVIFSLDDGQEIRFNNIRKFGRVY
LIDRDQPEQAGGLATLGPEPLSDNLSLEDFKELFKNRRALMKSLLLNQKFIAGIGNIYAD
EILFRAAILPDRTADQLSESEKEAIYYNMREILQKGIIYGGTSFSDYVNAFGEKGSFQEE
LRVHQREEKKCYQCGTKIKKIKISGRSTYFCPQCQK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagtagaaactgtagttaagggtttaggccctttaattcgcaat
aaaaaagtgacagaagtagaaattagagaaaaaaatatgattgcttaccctaaaaataat
attaaagcctttaaaaaagatttacttggagcaaagattgaaaaagttaaaagaagaggt
aagtatataattattgagctcaataattataaaaatttggtgattcacttaagaatgaca
ggaaagcttttagtcaaagaagttaaagattttagagataaacacactcatgttattttt
agtcttgatgatggccaagaaattcgctttaataatattagaaagtttgggagagtttac
ttaattgatagagatcagccagaacaggctggaggtttggcaactttagggccagaacct
ttaagcgataatttatctttagaagattttaaggaattatttaaaaatagaagagctttg
atgaaatctttacttttaaatcaaaaatttattgcaggaattggaaatatttatgcagat
gaaattctttttcgggctgcaattcttccagatagaactgcagatcaattgagtgaatct
gagaaagaggctatttattataatatgcgcgaaattttacaaaaaggtataatttatgga
ggtacaagttttagtgattatgttaatgcctttggtgaaaaaggttcttttcaagaagaa
ttaagagtacatcaaagagaagaaaaaaaatgttatcaatgtggaactaaaattaaaaaa
attaaaattagtggtcgttcaacatatttttgtcctcagtgtcaaaaataa
DBGET
integrated database retrieval system
