KEGG   Halanaerobium praevalens: Hprae_1579
Entry
Hprae_1579        CDS       T01941                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
hpk  Halanaerobium praevalens
Pathway
hpk03030  DNA replication
hpk03430  Mismatch repair
hpk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hpk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Hprae_1579
   03430 Mismatch repair
    Hprae_1579
   03440 Homologous recombination
    Hprae_1579
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpk03032]
    Hprae_1579
   03400 DNA repair and recombination proteins [BR:hpk03400]
    Hprae_1579
Enzymes [BR:hpk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Hprae_1579
DNA replication proteins [BR:hpk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Hprae_1579
DNA repair and recombination proteins [BR:hpk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Hprae_1579
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon T2SSK tRNA_anti_2
Other DBs
NCBI-ProteinID: ADO77706
UniProt: E3DPE4
LinkDB
Position
complement(1747096..1750452)
AA seq 1118 aa
MSNFVHLHNHTAFSLLDGATRIDSLIEKTKKYEMPAAAITDHGVLYGMIDFYRKAKKEGI
KPIIGAELYLASGSRFEKNRKRYHLLLLAQNKQGYYNLIQLVSKAWLEGFYYKPRVDKEL
LAKYSDGLICLSACLQGEIPQLLIKGQYDLAQKAAADYRAIFGKNNFFLELQDHNLQKEK
EVAQGLLKLSQAENIPTVITNDSHYLNQEDAELQDILLALQTGTTLADENRMTFTGQEFY
YKSPKEMKKLFPELNSAYQNTVKIADRVELNLDFNHFYLPKYPDLGKEKSAEELLQKLCF
EGLKAKEMDSDAKARKRLKYELNIIFEMGYAAYFLIVYDFVKYAEDNGIMVGPGRGSAAG
SLVAYLLKITKVNPLKYGLIFERFLNPERVTMPDIDIDFDENRDQIIEYVKKRYGKERVA
QIGTFGTMAARAAIRDVGRVLALPYKKVDQVAKLISSRKGIKASLKSQEKLQQLYQRDSQ
IKELIDYARGVEGLPRHISTHAAGVIIGAEPLAQIVPLQKQDQSVITQLPMGDLEALGLL
KMDFLGLRNLTVIKNCLQLIEKHKGKKIDIDNIPLTDKDVYDFLSTGKTAGVFQMESYLF
QSLNKKMKPEKFNDLIAMLALGRPGPLGSNIVDDFIAIRHGKKEAEYLHPKLKPILEETF
GMILYQEQVMEIASSLAGYSMGEADLLRRGMGKKKLKLVAAEREKFVKGAVARGIQENIA
QKIFDQMEYFAGYGFNKSHSTAYAFLAYQTAYLKYHYPAEFMAALFSSVMGNQDKIADYI
NSLAEIGLKIIPPDINRSDHNFTAANDNEILYGLKAIKNVGSAAIEAVIKARKSEKFKSL
VDFLKRVDISQINIQSLEAFVKAGAFDEIAVNRASLLLNYEELYNKYNNLAKNRAQGQQS
FAELFEDQNKFMQTDLKYQKVDELKTETILEQEKEFLGIYISAHPLDQYQAKLDKINFYS
INKALTVDSGKKVLTAAYLSNYKEHITKRKNKMAFLTVSDHQDKMEVIVFSDLFKKLNFD
LAETKGLLIYGEKDQKKLIAKKIISLNQNILIINISNFKQKRIIKLKKYLLKKEGEIPVL
LKRNNKLIITPAKYNINFSQKTKTELARALKKEEYNFI
NT seq 3357 nt   +upstreamnt  +downstreamnt
atgtctaattttgtgcaccttcataatcatacagcttttagcttattagatggagcaact
agaattgattctttaatagaaaaaacaaaaaaatatgaaatgccagcagctgcaattact
gatcacggtgtactctatggcatgatagatttttataggaaggctaaaaaagaagggatt
aagccaattattggagctgaactttatttggcttctgggagtagatttgaaaaaaataga
aaaagatatcatttacttttacttgctcaaaataaacaaggctactataatttgattcag
ttggtttctaaggcttggctagaaggattttattataaaccacgtgtagataaagaactt
ttggctaaatatagtgatggccttatttgtttatccgcctgtctccagggagagatacca
caattattaattaaaggtcaatatgatttagcccaaaaagcagcagctgactatagggct
atttttggtaagaataacttttttttagagttacaagatcataatttgcaaaaagaaaaa
gaagttgctcaaggtttattaaaattaagccaggctgaaaatattcccactgttattaca
aatgatagtcattatttaaatcaagaagatgctgaattacaagatattttattagcttta
caaacagggacaactttagctgatgaaaatagaatgacttttactggccaagaattttat
tataaaagtccaaaagagatgaaaaaactatttcctgaacttaattctgcttatcaaaat
actgttaaaattgcagatagagttgaacttaatttagatttcaatcatttttatttacct
aaatatccagatttaggtaaagagaaatctgcagaagaacttttgcaaaaattgtgtttt
gaaggacttaaagcaaaagaaatggattcagacgctaaagctagaaagagattgaaatat
gaattgaatattatttttgagatgggatatgctgcatattttttaattgtttatgatttt
gtaaaatatgctgaagataatggaattatggttggcccaggtcggggttcagctgctggt
agccttgtagcttatcttttgaaaataaccaaagttaaccctttaaaatatggtttgatt
tttgaacgttttttaaatcctgaaagggtaacaatgcctgatattgatatagactttgat
gaaaatcgggatcagattattgaatatgtaaaaaaaagatatggtaaagaaagagtagct
caaataggaacttttggaacaatggcagctcgagcagccattagagatgtaggaagagtt
cttgctctgccatacaaaaaggtggatcaagttgcaaaacttatttcttctcgcaaagga
ataaaagcctcattaaaaagtcaagaaaaattacaacagctttatcaaagagattctcaa
attaaagaattaattgattatgctagaggagtagaaggcctgccacgacatatctcaaca
catgcagctggagttataattggagcagagcccttagctcaaattgtacctttacaaaag
caggatcaaagtgtaattactcaactgccaatgggagatttagaagctctcggtcttttg
aaaatggattttttaggtttaagaaatttaactgtaattaaaaattgcctgcaattgata
gaaaaacataaaggaaaaaaaattgatattgataatattccactaactgataaagatgta
tatgactttttaagtacaggtaaaactgctggagtttttcaaatggaatcttatttattt
caatctttaaataaaaaaatgaaaccagaaaaatttaatgacttaattgctatgttagcc
ttagggagaccaggacctttagggagtaatattgttgatgattttattgctatcagacat
ggaaaaaaagaagcagaatatttacatccaaagttaaaacctattttagaagaaacattt
ggtatgattttatatcaagaacaggtaatggaaatagcaagtagtctggctggctatagt
atgggcgaagctgatcttttacgtcgagggatgggcaaaaagaaattgaaattagttgct
gcagaaagagaaaaatttgttaaaggagcagtagccagagggattcaagaaaatattgct
caaaaaatatttgatcaaatggaatattttgcaggttatggttttaataaatctcattct
acagcatatgcttttttagcttatcaaactgcttatttaaaatatcattatccagctgag
tttatggctgctttattttcgtcagtaatgggtaatcaagataaaattgctgattatatt
aattcattagcagaaattggacttaaaattattccaccagatattaatagaagtgatcat
aattttactgcagcaaatgataatgaaattttatatgggcttaaagcaattaaaaatgtt
ggttctgctgcaattgaagctgtgataaaagcaagaaaatcagaaaagtttaaatcactt
gttgattttttaaaaagagttgatatttcccaaattaatattcagagtttagaggcattt
gttaaagctggtgcttttgatgaaattgcagttaatagggcttcactgcttttaaattac
gaagaactttataataagtataataatttagctaaaaatagagctcaaggtcagcaatct
tttgctgaattatttgaagatcaaaataagtttatgcaaactgatctaaaatatcaaaaa
gtagatgagttaaaaacagaaactattttagaacaagaaaaagagtttttaggcatttat
atttctgctcatccacttgatcaatatcaagccaaattggataaaattaatttttattca
atcaataaagctctaacagttgattctggcaaaaaagttttaactgctgcttatttaagt
aattacaaagaacatataactaaacgtaaaaacaaaatggcttttttaactgttagtgat
catcaggataaaatggaagtaatagttttttcagatttatttaaaaaattaaattttgat
ttagctgaaacaaaagggcttttaatttatggagaaaaagatcaaaaaaaattaattgct
aaaaaaataatctctttaaatcaaaatattttaattattaatatttctaattttaagcaa
aaaagaattattaaattaaaaaaatatttattaaaaaaagaaggtgaaattcctgttctg
ttgaaaagaaataataagttaataataactcccgctaaatataatattaatttttctcaa
aaaacaaaaacagaattagctagagccttaaaaaaagaagaatacaattttatttaa

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