Halanaerobium praevalens: Hprae_2015
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Entry
Hprae_2015 CDS
T01941
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hpk
Halanaerobium praevalens
Pathway
hpk03030
DNA replication
hpk03430
Mismatch repair
hpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hprae_2015
03430 Mismatch repair
Hprae_2015
03440 Homologous recombination
Hprae_2015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpk03032
]
Hprae_2015
03400 DNA repair and recombination proteins [BR:
hpk03400
]
Hprae_2015
Enzymes [BR:
hpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hprae_2015
DNA replication proteins [BR:
hpk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Hprae_2015
DNA repair and recombination proteins [BR:
hpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Hprae_2015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
ResIII
AAA
TIP49
AAA_5
Motif
Other DBs
NCBI-ProteinID:
ADO78139
UniProt:
E3DRS5
LinkDB
All DBs
Position
complement(2205636..2206622)
Genome browser
AA seq
328 aa
AA seq
DB search
MSFNSIIGQEEAVSILQDEIKKERISHAYLFAAKKGSGKSKLAFEFAKAIFCQESELDSC
GQCINCRKLEHQNHPDFKIISILEAKTAISIAQIRDLKKEIAYKPYDSEHKIYVIEAAEK
MTKEAANSLLKTLEEPPSFATIILLTEDTGKLLPTLVSRCQQIELKSVSQSKIQKLLLNK
GLNSEQAEIISRTAAGSPGKALAISKIEAYFEKRKEVYDFLRDVRNKNTIEIFAITKKLS
ELLQTDFPCFDLLSDWYRDIMMIKQDYLEAVINKDYLSDLKKLAQTLDLKQIIKNLELIA
ESEKNIELNIRAELSLEVLFFKLRQPDQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaactcaattattggacaagaagaagccgtttcgattttgcaggatgagatt
aaaaaagagaggataagtcatgcttatctttttgctgccaaaaaaggtagtggtaaatct
aaattagcttttgagtttgctaaagctattttttgtcaggaatctgaacttgatagctgt
ggccaatgtattaattgtcgtaaattagagcatcaaaaccatcctgattttaaaatcatt
tctattttagaagctaaaactgctatttctattgctcagattagagatttaaaaaaagaa
atagcctataaaccttatgatagtgaacacaaaatttatgttattgaagctgccgaaaaa
atgactaaagaagcagctaattcgcttttaaaaactttggaagaaccaccttcttttgct
actatcattttattaacagaagacaccggtaaattactgccaacacttgtttcgcgttgt
caacaaatagaattaaaaagtgttagtcagtccaagatccaaaaattgttattaaataaa
ggtttaaattcagaacaggctgaaataataagtagaactgctgctggcagtcctggtaag
gcacttgctatttcgaaaattgaagcttattttgaaaagagaaaagaagtttatgatttt
ttaagagatgtgaggaataaaaatacaattgagatttttgcaattacaaaaaaattaagt
gaacttttacagactgattttccctgttttgatttgctatcagactggtatcgcgatata
atgatgattaaacaggattatctggaagcagtgatcaataaagactatttatctgactta
aaaaaacttgctcaaactttagacttaaagcaaataattaaaaacttagagctaatagca
gagagtgaaaaaaatatagaactgaatattagggcagaacttagtctggaagttttattt
ttcaaactgcgccagcctgatcaataa
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