Helicobacter pylori B8: HPB8_1068
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Entry
HPB8_1068 CDS
T01262
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hpl
Helicobacter pylori B8
Pathway
hpl00541
Biosynthesis of various nucleotide sugars
hpl01100
Metabolic pathways
hpl01250
Biosynthesis of nucleotide sugars
Module
hpl_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
hpl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HPB8_1068 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpl01005
]
HPB8_1068 (rfaD)
Enzymes [BR:
hpl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HPB8_1068 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hpl01005
]
Core region
HPB8_1068 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
FCSD_central
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
CBI66625
UniProt:
D7FEL8
LinkDB
All DBs
Position
complement(1050040..1051032)
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AA seq
330 aa
AA seq
DB search
MRYIDDGLENQTILITGGAGFVGSNLAFYFQENHPKAKVVILDKFRSNTLFSNNRPSSLG
HFKNLIGFKGEVIVADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFL
NLLEIARSKKAKVIYASSAGVYGNTKAPNVVGSNESPENVYGFSKLCMDEFVRFHSNDNI
QVGLRYFNVYGPREFYKEKTASMVLQLALQALAFKEVKLFEFGEQLRDFVYIEDVIQANV
KAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVSYIKNPYAFFQKHTQAHIEPAIL
DLDYTPLYDLESGIKDYLPHIHAIFKEQCA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatattgatgatggattagaaaatcaaacgattttaatcaccggtggggctggc
tttgtaggcagtaatttggccttttattttcaagagaaccaccctaaagctaaagtagtc
attttggataagtttcgcagtaacacgcttttcagtaataaccgcccgagttctttaggg
cattttaagaatttaatcggttttaagggtgaggtgattgtagctgatattaacaacccc
ttagatttaaggcgtttagaaaaattgcattttgattatttgttccaccaagccgctgtt
tctgatacgaccatgctcaatcaagaattagtgatgaagaccaattatcaggctttttta
aaccttttagaaatcgctcgctccaaaaaggctaaagtgatttacgcttcttcagcgggc
gtttatggcaacaccaaagcccccaatgtggtaggctcaaacgaaagccctgaaaatgtt
tatggcttttccaagctttgcatggacgaatttgtccgattccattcaaacgacaatatt
caagtgggcttaaggtattttaatgtctatgggcctagggaattttataaagaaaaaacc
gcttccatggttttgcagcttgctttgcaagcgctggcgtttaaggaagtcaagcttttt
gaatttggcgagcaattaagggattttgtctatattgaagatgtgatccaagcgaatgtg
aaagcgatgaaggctcaaaaaagcggggtttataatgtgggctattcgcaagccagaagt
tataatgaaatcgttagcattttaaaagagcatttaggggattttaaagtgagctatatc
aaaaacccttacgctttcttccaaaagcacacccaagcgcatattgagcctgctattttg
gatttagattacacccctttatacgatttggaaagcggtattaaagattatttgccccat
atccatgcgatttttaaagaacaatgcgcatga
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