Helicobacter pylori B8: HPB8_1224
Help
Entry
HPB8_1224 CDS
T01262
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hpl
Helicobacter pylori B8
Pathway
hpl03410
Base excision repair
hpl03430
Mismatch repair
hpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPB8_1224 (recJ)
03430 Mismatch repair
HPB8_1224 (recJ)
03440 Homologous recombination
HPB8_1224 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpl03400
]
HPB8_1224 (recJ)
DNA repair and recombination proteins [BR:
hpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HPB8_1224 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPB8_1224 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HPB8_1224 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
GLUCM-like_C
Motif
Other DBs
NCBI-ProteinID:
CBI66781
UniProt:
D7FF24
LinkDB
All DBs
Position
1198926..1200476
Genome browser
AA seq
516 aa
AA seq
DB search
MKQKLKAQIKERVASIAYNEKGFPSPFLFKDLKKAALKIIEAMRANTEILVVGDYDADGV
ISSTIMAKFFESLNYKHVRIAIPNRFIDGYGISKKFLEKHHAPLIITVDNGISAFEVARF
CKEKNYTLIITDHHCLHHDEVPDAYAVINPKQPDCDFIQKEVCGALVAFYLCYGIHQLLG
KEKSHSSELLCLAGVATIADMMPLTFFNRFLVSKALYFLQKESLGAMGFLRQREVFRKRS
LKASDISFNIAPLINSAGRMQDAKMALDFLSANNFQDGYFLYERLKACNMKRKMIQQQVF
EEAFKHAMVGEKIIVAFKDDWHEGVLGIVASKLVEATQKPSLVFTFKEGVYKGSGRSSSN
IDLIDALNGVSSLLLGYGGHRQACGLSVGKNNIISLFETLENFDFKILPFCEKEPPLTLA
LKDIDRELLEIIEAGEPYGQENPEPLFQAQNLEVIEEKIIKESHQVLRFKDKECVKEAIY
FNTERFLKAGEKVSAIFSVELDEYSNEPKMFVKSLL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaagcttaaagctcaaatcaaagagcgagtggcttctatcgcttataatgaa
aaagggtttcctagcccctttttattcaaagacttgaaaaaagccgcgctcaaaatcata
gaagccatgcgcgcaaacacagagattttagtggtgggcgattatgacgctgacggcgtg
attagctctactatcatggcaaaattttttgaaagcctaaattataagcatgttcgcatt
gcaatccctaatcgcttcattgatggctatgggatttctaaaaaatttttagaaaaacac
cacgcccctttaatcatcacggtggataacgggattagcgcctttgaagtcgcgcgattt
tgtaaagaaaaaaattacacccttatcatcaccgatcaccattgcttacaccatgatgaa
gtcccagacgcttatgcggtgatcaaccccaagcaaccggattgtgattttatccaaaag
gaagtgtgtggggcgttggtggcgttttatttgtgctatggcatccaccagcttctagga
aaagaaaaaagtcattctagcgagttgttgtgcttggcgggtgtcgccacgatcgcagac
atgatgcctttgactttttttaaccgctttttagtttctaaagccttgtattttttgcaa
aaagaatccttaggggcgatggggtttttgcgccaaagagaagtttttagaaaacgctct
ttaaaagcgagcgatatttcttttaacatcgcccccttaatcaactccgcagggcgcatg
caagatgcgaaaatggctttagattttttaagcgcgaataattttcaagatggctatttt
ttgtatgaacgcttgaaagcatgcaatatgaagcgtaaaatgatccaacagcaggttttt
gaagaggcttttaagcatgcgatggttggcgaaaaaattatcgtcgcttttaaggatgat
tggcatgagggcgtgcttgggattgtggcttcaaaattagtggaagccactcaaaagcca
agcctggtttttacctttaaagaaggggtgtataaagggagtggtcgcagctcttcaaat
attgatctcattgacgctttgaatggggtttcttctttgttgctcggctatggggggcat
aggcaagcttgcggtttgagcgttggaaaaaacaatatcatctcgctctttgaaacttta
gaaaattttgattttaaaatcctacctttttgtgaaaaagaaccccctttaacgctcgca
ttaaaagacattgacagagagcttttagagattatagaagcgggcgaaccttatgggcaa
gaaaaccctgagccgctctttcaagcgcaaaatttagaagtcatagaagaaaaaatcatt
aaagaaagccaccaggttttgcgttttaaggataaagaatgcgtcaaagaggctatttat
tttaacactgagcggtttttgaaagcgggcgaaaaggtgagcgcgatttttagcgtggaa
ttagatgagtattctaatgagcctaaaatgtttgttaaaagcttgttgtag
DBGET
integrated database retrieval system
