Helicobacter pylori B8: HPB8_1272
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Entry
HPB8_1272 CDS
T01262
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
hpl
Helicobacter pylori B8
Pathway
hpl00300
Lysine biosynthesis
hpl00470
D-Amino acid metabolism
hpl01100
Metabolic pathways
hpl01110
Biosynthesis of secondary metabolites
hpl01120
Microbial metabolism in diverse environments
hpl01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hpl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPB8_1272 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPB8_1272 (lysA)
Enzymes [BR:
hpl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HPB8_1272 (lysA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
CBI66829
UniProt:
D7FF72
LinkDB
All DBs
Position
complement(1239960..1241177)
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AA seq
405 aa
AA seq
DB search
MFNYEELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHL
ESGADCVSIGEIYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIE
KIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPV
SVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYD
YAQGILNSLQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPS
LYHAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKDARLPELEPGDKIAIEKVGAYGS
SMASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLEEEGLKGV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattatgaagagctgtttcaaactcacaaaacccctttttacctctatgatttt
gacaaaatcaaacaggcttttttgaattataaagaagcgtttaaggggcgtaagtctttg
atttgctacgctttaaaggcgaattctaatttgagtatcctctctttattagcccattta
gagagcggggcggattgcgtttccataggcgagatatatagggctttaaaagctgggatc
aagccttataggatcgtgtttagcggggtgggtaagagcggatttgaaatagaacaagcc
ctaaaactcaacattttatttttgaatgtagaaagttttatggaattaacaacgattgaa
aaaatcgctcaatctttagggataaaggccaggatttccattagaatcaaccctaatatt
gacgctaaaacgcacccctatatttctaccggtttgaaagaaaataagtttggcgtagga
gaaaaagaagctttagaaatgtttctttgggctaaaaaaagcgcgtttttagagcctgtt
agcgtgcattttcatatcggctcacagctcttagatttagagccgattatagaagcgagc
caaaaggtggctaaaatcgctaaatctttgattgccctagggatagatttgcgttttttt
gatgtgggcggaggcattggcgtgagctatgaaaatgaagaaacgattaagctttatgat
tacgcgcaagggattttaaattcgcttcaaggcttggatttgacgattatttgtgagccg
ggccgatccatcgtggctgagagtggggaattgatcacgcaggttttgtatgaaaaaaag
gctcaaaacaagcgctttgtggttgtggatgcgggcatgaatgattttttacgccccagt
ttgtatcatgctaagcatgccataagggttataacgccctctaaggggcgtaagatctcg
ccttgcgatgtggtagggcctgtgtgtgagagcagcgacacttttttaaaagatgcccgt
ttgccagaattagagccaggcgataaaatagcgattgagaaggttggggcttatggctct
agcatggccagtcaatacaattcgcgccccaaactcttagaattagccctagaagatcac
aaaatcagggtgataagaaaaagagaagctttagaagatttatggcgcttagaagaagaa
ggcttaaaaggggtttga
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