Helicobacter pylori B8: HPB8_1449
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Entry
HPB8_1449 CDS
T01262
Symbol
topA5
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpl
Helicobacter pylori B8
Brite
KEGG Orthology (KO) [BR:
hpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpl03032
]
HPB8_1449 (topA5)
03400 DNA repair and recombination proteins [BR:
hpl03400
]
HPB8_1449 (topA5)
Enzymes [BR:
hpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPB8_1449 (topA5)
DNA replication proteins [BR:
hpl03032
]
Prokaryotic type
DNA Topoisomerases
HPB8_1449 (topA5)
DNA repair and recombination proteins [BR:
hpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPB8_1449 (topA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1272
Zn_ribbon_LysW
Lar_restr_allev
DUF7575
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
CBI67006
UniProt:
D7FFP9
LinkDB
All DBs
Position
complement(1416448..1418658)
Genome browser
AA seq
736 aa
AA seq
DB search
MKHLIIVESPAKAKTIKNFLDKNYEVIASKGHVRDLSKFALGIKIDETGFTPNYVVDKDH
KELVKQIIELSKKASITYIATDEDREGEAIGYHVACLIGGKLENYPRIVFHEITQNAILN
ALKTPRQIDMSKVNAQQARRFLDRIVGFKLSSLIASKITKGLSAGRVQSAALKLVIDRER
EIKAFKPLTYFTLDALFDPHLEAQLISYKGNKLKVQELIDGKKAQEIKNELEKESYIISS
IVKKSKKSPTPPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVATPQGVMGVITYMRT
DSLNIAKEALEEARNKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRPTSIILEPNALK
DYLKPEELKLYALIYKRFLASQMQDALFESQSVVVACEKGEFKASGRKLLFDGYYKILGN
DDKDKLLPNLKENDPIKLEKLESNAHVTEPPARYSEASLIKVLESLGIGRPSTYAPTISL
LQNRDYIKVEKKQISALESAFKVIEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQV
LKDFYYPFMDKIEAGKKNIISQKVHEKTGQSCPKCGGELVKKNSRYGEFIACNNYPKCKY
VKQTENAHDGANQELCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNAKEIIEG
VKCPECGGDIALKRSRKGSFYGCNNYPKCNFLSNHKPINKRCEKCHYLMSERIYRKKKAH
ECIKCKERVFLEEDNG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaccttattattgtagaatccccagcaaaagccaaaaccattaaaaattttttg
gataaaaattacgaagtcatcgcctctaaagggcatgttagggatttatccaaattcgct
ttaggcattaagattgatgaaacaggcttcactcctaattatgtcgtggataaagaccat
aaagagcttgtcaaacagatcatagagctttctaaaaaagcatctattacttatatcgct
accgatgaagacagagaaggggaggcgataggctatcatgtggcatgtttgattgggggg
aaattagagaattatcctaggattgtttttcatgagatcacgcaaaatgcgattttaaac
gctctaaaaaccccacgacaaattgacatgtctaaggtcaatgcccaacaagccaggcgt
tttttagatcggatcgtgggttttaagctcagctcgttgattgcatcaaagatcactaaa
ggtttgagcgctgggcgggtgcagagtgctgcattaaagcttgtgattgatagagaaagg
gaaatcaaagcctttaagcctttaacctacttcacgctagacgccttgtttgatccgcat
ttagaagcgcaactcatcagttataagggcaacaaactcaaagtccaagaactgattgat
ggaaaaaaagcccaagagattaaaaacgaattagaaaaagaaagctatattatttctagt
atcgttaaaaaatctaaaaaatcccctacaccgccccctttcatgacttccactttacag
caaagcgcttccagtcttttaggcttttcgcccacaaaaactatgagtatcgctcaaaaa
ttatatgaaggcgttgccaccccgcaaggggttatgggcgtgatcacttacatgaggacc
gatagcttgaatatcgctaaagaagctttagaagaagcgaggaataagattttaaaagac
tatggcaaagactacttgccccctaaagccaaagtctattccagcaagaataaaaacgcc
caagaagcccatgaagcgatcaggcccacttccattattttagagccaaacgctttaaaa
gactaccttaagcctgaagaattaaaactctatgccttaatttacaaacgcttcttagct
tctcaaatgcaagacgctctttttgaaagccaaagcgtggttgtggcttgtgaaaaaggc
gagtttaaagcgagtggcagaaaactcctttttgatggctattataaaattttaggcaat
gacgataaggacaaattgctccccaatttgaaagaaaatgaccccattaaattagaaaaa
ctagagagcaacgcccatgttacagaacctccagcgcgctattcagaagcgagcttgatt
aaagttttagaaagtttaggtataggcaggcccagcacctacgccccaacgatttctctt
ttacaaaacagagactacatcaaggtagaaaaaaagcaaatcagcgctttagagagcgct
tttaaggtgatagaaattttagaaaagcattttgaagaaatcgtggattccaaattcagt
gcttctttagaagaggaactggacaatatcgctcaaaataaagccgactaccaacaagtc
ttaaaggacttttactacccctttatggataaaattgaagccgggaaaaaaaacatcatc
tctcaaaaagtgcatgaaaaaaccggccaatcatgccctaaatgcggtggggagttagtc
aaaaagaatagccgttatggggagtttatcgcttgcaacaattaccctaaatgcaaatat
gtcaaacaaactgaaaacgctcacgatggagccaatcaagaattgtgtgaaaaatgcgga
ggggaaatggtgcaaaaattcagcagaaacggggcgtttttagcttgcaacaactaccct
gaatgcaaaaacaccaaatcgctaaaaaacactcctaacgcaaaagaaataatagaaggc
gtgaaatgcccagaatgcgggggggatattgccttaaaaaggagcaggaaaggctcgttt
tatggctgcaacaattaccctaaatgcaattttttatccaaccataaacccattaataag
cgttgcgagaaatgccattatttgatgagtgaaagaatctatcgcaaaaaaaaggcgcat
gaatgcattaaatgcaaagagcgcgtgtttttagaagaagataatggctaa
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