Helicobacter pylori B8: HPB8_52
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Entry
HPB8_52 CDS
T01262
Symbol
uvrD
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpl
Helicobacter pylori B8
Pathway
hpl03420
Nucleotide excision repair
hpl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPB8_52 (uvrD)
03430 Mismatch repair
HPB8_52 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpl03400
]
HPB8_52 (uvrD)
Enzymes [BR:
hpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPB8_52 (uvrD)
DNA repair and recombination proteins [BR:
hpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPB8_52 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HPB8_52 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
RNase_H_2
DncV-like_NTFase
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
CBI65609
UniProt:
D7FBQ2
LinkDB
All DBs
Position
58407..60452
Genome browser
AA seq
681 aa
AA seq
DB search
MGFEKSILDNLNGAQKIATSHIQGPLLILAGAGSGKTKTLTSRLAYLIGVCGVPSENTLT
LTFTNKASKEMQERALKLLKNQALIPPLLCTFHRFGLLFLRQHMSLLKRACDFSVLDSDE
VKTLCKQLKISNFRANISQIKNGMMDLSVQDSECHKAYELYQNALKKDNLVDFDDLLFLS
LKILQDNETIAKETSERYHYIMVDEYQDTNALQLEFLKKLSCTHHNLCVVGDDDQSIYGF
RGADISNILNFSKHFKGAKIVKLETNYRSSAEILACANSLISHNQHRHVKTLQSFKGSHK
SVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRL
IGAVSFYERAEVKDALAFMHLVAKKDDRFFIKRVLNKPPRGLGKITQEWIFSLLDEEDLN
LEEALKLGAFKDKLNPKNEYALKKFMTMIGRLREAFEISVEEFCARFLEETNLLKSYEKE
DNYEEREGFVKELLSLVKEHFKTNPTHSLLDFLNESVLDVHNAENAQKVSCMSVHMSKGL
EFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVKERSYFGRKIS
CSPSVFLEEAQLLKQDKPPKQNHQKDTPIKVGDLIRHKIFGTGRVLGVEKGLSGVCLKIN
CGGNVYDKISEKFVEKVDNEF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgggttttgaaaaaagcattttagacaatttgaacggagcgcaaaaaatcgccacaagc
cacattcaagggcctttattgattttagcgggagctgggagcggtaagactaagacttta
acgagccgtttagcgtatttgattggcgtttgtggcgtgcctagcgagaacactttaacg
ctcactttcaccaataaagcgagtaaagaaatgcaagaaagggctttgaaattgttgaaa
aaccaagcccttatcccccctttgctttgcactttccatcgttttggtttgctgttttta
aggcaacacatgagccttttaaaaagagcgtgcgatttttcggtgttagatagcgatgaa
gtcaaaacgctgtgcaaacagctcaaaatttcaaactttagagccaatatttctcaaatc
aaaaacggcatgatggatttaagcgtgcaagatagcgaatgtcataaagcctatgagctt
tatcaaaacgcgctcaaaaaagacaatttagtggattttgacgatttgctttttttaagc
cttaagattttgcaagataatgaaaccatcgccaaagagactagcgagcgctaccactac
attatggtagatgagtatcaagacacgaacgccctgcaattggagtttttaaaaaaattg
agttgcacgcaccataatttgtgcgtggtgggcgatgacgatcagagcatttatgggttt
agaggggctgatatttctaacattttaaatttttccaagcattttaaaggggctaaaata
gtgaaattagagaccaactaccgctccagcgctgaaattttagcgtgcgctaattctctc
atcagccataaccaacaccgccatgttaaaacgcttcaaagttttaagggatcgcataaa
agcgtggtttgtaaagaatatttgacacaaaaagaagagagcttagatgtggcttatcaa
atcaaagcccttttaaagaagggcgaaaatttagaaaatatcgctattttgtaccgctta
aacgggcttagccgcagcattgaagagagcttgaacgctttgaatatcccttataggctc
attggggcggtgagtttttatgaaagagctgaggttaaagacgctttggcgttcatgcat
ttagtggctaaaaaagacgatcgcttttttattaagcgcgttttaaacaagcccccaaga
ggccttggcaagatcactcaagaatggattttttctcttttagatgaagaggatttgaat
ttagaagaagcgctaaaacttggggcgtttaaagacaaactcaaccctaaaaacgaatac
gctttaaagaaattcatgactatgatagggcgtttgagggaggcttttgaaatttcagta
gaggagttttgcgctcggtttttagaagagactaaccttttaaaaagctatgaaaaagaa
gacaattacgaagaaagggagggttttgttaaagagcttttaagtttagtgaaagagcat
tttaaaactaaccccacgcattctttgctggattttttgaatgaaagcgtgttagatgtc
cataatgcagaaaacgcgcaaaaagtgagctgcatgagcgtgcatatgagtaagggatta
gagtttaagcatgtgtttgtgatcgggttagaagaagggtttttcccgcatagggggttc
aatcaagaaagcgatttagaagaagaaaggcgcttggcttacgtagcgatcactagggct
aaagaaggattacagctctcttatgtcaaagagcgttcgtattttgggaggaaaatttct
tgctcgccctctgtgtttttagaagaagcccagttgctcaaacaagacaaaccccctaaa
caaaatcaccaaaaagatacgcccattaaagtgggggatttgatcaggcataagattttt
ggcaccggtagggttttaggcgtagaaaaaggcttgagcggtgtgtgcttgaaaatcaat
tgcggagggaatgtctatgataaaatctcagaaaaatttgtagaaaaagtggataacgag
ttttga
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