KEGG   Helicobacter pylori B8: HPB8_548
Entry
HPB8_548          CDS       T01262                                 
Symbol
virB4-1
Name
(GenBank) type IV secretion system protein VirB4
  KO
K12053  ComB4 competence protein
Organism
hpl  Helicobacter pylori B8
Brite
KEGG Orthology (KO) [BR:hpl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpl02044]
    HPB8_548 (virB4-1)
Secretion system [BR:hpl02044]
 Type IV secretion system
  DNA uptake competence system protein
   HPB8_548 (virB4-1)
SSDB
Motif
Pfam: CagE_TrbE_VirB TrwB_AAD_bind FtsK_SpoIIIE DUF87 TraG-D_C AAA_22 PduV-EutP AAA_29 Zot AAA_7 SAM_DrpA MMR_HSR1 RsgA_GTPase RNA_helicase AAA_16 ABC_tran Sporozoite_P67
Other DBs
NCBI-ProteinID: CBI66105
UniProt: D7FD48
LinkDB
Position
complement(522037..524613)
AA seq 858 aa
MLESALKYCKEKAIDLLAGFVPKTYSMAQECNILGLYDDTFIITKQENLVGIISLQGLSY
SNLMQKDLEGYFDTRQNVLNTISKDIQLRIVAKRRKEFINQSPNIDNIYAKAIITQFESK
EIYKTEYFLVFETITSNVKSFFEKKKLEMTTSINEELEESSKEDKQENENSSNETHSNTS
SKKDKKNKFKKKITFSATSKRALLIQTIERVKNALKEFKPTLLNSKEVLNFYAEYINGKY
IAFNPKLKRLSDSYIASNVHFKKDYFVIEFQNQNTFCACVGIKAYESEEISSIPISTLLH
TKIELDLIFHIRSLGQFESLNFLKTKKKLTLSKIVKADIDNYIELVQANRLSMQECALNL
VIRAKSKAKLDKSLKEILSLLNNAGLGSVAETIGLKPSYFSFFPNNANINPRMRHQTSQV
IASLILFEKNNTGFRANSWGDMPLSVFKNLDHSPYLFNFHNQEVKHKGVLAHNVARVVGH
TMIIGATGAGKTTLISYLMMSALKYSNIDILALDRLNGLYSFTKYFDGIYNQGENFHINP
FSLEDSATNRAFLLHFYAQMAKVDSYDDHKDKVEDRTALLNAIDTMYRNYNDEVKQAKFS
NQELPLPFDLKEFVNAIVKTNADILDSSFEDYLKSSLFSSRMDSLDFKTRISTINTDSIL
HNDDDAGLLAYYVFHKMIDRALRINRGFLCFIDEFKSYAQNEIMNKKINEIITQARKANG
VIVLALQDINQLSEVRNAQSFIKNMGQLILYPQRNIDTKDLNDKFGIRLSDTEKHFLENT
AVNEYKVLLKNMNDGSSNIIDVSLSSLGNYLQIFSSNSSMVEHIDNLIKHYPKTWREVFV
SNKHENFDDKKHLEKVLK
NT seq 2577 nt   +upstreamnt  +downstreamnt
atgttagaaagcgcccttaaatattgcaaggaaaaagccatagaccttttagcagggttt
gtgccaaaaacctattctatggcacaggagtgcaatattttaggcttgtatgatgatact
ttcattattaccaaacaagaaaatctagtaggcattatatccttacaaggactaagctat
tctaatttaatgcaaaaagacttagagggctattttgatactagacaaaatgttctcaac
accattagtaaagacattcaattaagaattgtggctaaaaggcgtaaggaatttatcaat
caaagtccaaatattgacaatatttatgccaaagctattatcacacaatttgaaagcaag
gaaatctataaaacagagtattttttagtgtttgaaactatcacttctaatgtcaagtct
ttctttgaaaaaaagaaattggaaatgactacttcaattaatgaagagttagaagaaagc
tctaaagaagataaacaagagaatgaaaatagctccaatgaaactcattcaaacacaagc
tctaaaaaagacaagaaaaacaagttcaaaaaaaagataacctttagtgccacaagtaaa
agagccttactcattcaaaccatagaaagagtaaaaaacgctcttaaagaatttaaaccc
actttactaaattctaaagaagtattaaatttctacgcagaatacatcaatggcaaatac
atcgcctttaatcctaaattaaagcgattaagcgatagctatattgcatctaatgtgcat
tttaagaaagattactttgtcattgaatttcaaaatcaaaacaccttttgtgcgtgtgtg
gggattaaggcttatgagagcgaagaaatttcttcgatccctatatctactcttttacac
accaaaattgaactagatttaatctttcatatccgctctttagggcaatttgaaagcctg
aattttttaaaaactaagaaaaagctcacgctttctaaaatagtaaaagctgatattgat
aattatatagaattagtgcaagccaatcgtttgagcatgcaagagtgtgctttaaactta
gttataagggctaaaagtaaagctaaattagacaagtctttaaaagagattttatccttg
cttaataatgctggactaggcagtgttgcagaaactatagggctaaaaccatcttatttt
tcattcttcccaaataacgccaatatcaaccctagaatgagacatcaaacttcccaagtc
atagcatctttgattttgtttgagaaaaataatacaggttttagagcaaattcttggggg
gatatgcccttatctgtgtttaagaacctagaccatagcccttatttgtttaattttcat
aatcaagaagtcaaacataagggcgtgttagcccacaatgtcgcacgagtagtgggacat
accatgattataggagcaacaggtgctggtaaaaccacactcattagctatttgatgatg
agtgccttaaaatattctaacattgatattttagctcttgatagactaaatggtttgtat
tcctttaccaagtattttgatgggatttataatcaaggcgaaaactttcatattaaccct
ttttcattagaagatagcgcaactaatagagcctttttattgcatttttatgcccaaatg
gcaaaagtggatagttatgatgaccataaggataaagtagaagatagaacagccctttta
aatgctattgatacgatgtatagaaattataacgatgaagtcaaacaagccaaatttagc
aaccaagaattaccccttccttttgatttaaaagagtttgtcaatgccattgttaaaacc
aatgcagacattttagatagtagttttgaagactatttaaaatcttccttattttctagc
cgaatggatagtctagattttaaaactcgtattagcaccataaataccgatagcatttta
cataatgatgatgacgctgggcttttagcctactatgtctttcataagatgattgacaga
gccttaagaatcaatcgtgggtttttatgctttattgatgagtttaagtcttacgctcaa
aatgaaataatgaataaaaaaatcaatgaaatcattactcaagctagaaaggctaatggg
gtgattgttctagccttacaagacattaaccaactaagcgaagtgagaaacgctcaaagc
tttataaaaaatatggggcaattgattttgtatccccaaagaaatattgataccaaagat
ttaaacgataaatttggcattagactaagcgatacagaaaaacattttttagaaaacacc
gccgttaatgaatacaaagtcttactcaaaaacatgaatgatggctcatctaacattata
gatgtgagcctaagttctttgggtaattacctacaaatctttagctctaattctagcatg
gtagaacacattgataatctcattaagcattaccctaaaacttggcgagaagtctttgtg
agtaacaaacacgaaaattttgatgacaaaaaacacttagaaaaggtgcttaaatga

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