Helicobacter pylori B8: HPB8_744
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Entry
HPB8_744 CDS
T01262
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hpl
Helicobacter pylori B8
Pathway
hpl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPB8_744 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpl03021
]
HPB8_744 (rho)
03019 Messenger RNA biogenesis [BR:
hpl03019
]
HPB8_744 (rho)
Transcription machinery [BR:
hpl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HPB8_744 (rho)
Messenger RNA biogenesis [BR:
hpl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HPB8_744 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
S1CSD-TOTE-2
AAA_22
AAA_28
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
CBI66301
LinkDB
All DBs
Position
complement(722188..723504)
Genome browser
AA seq
438 aa
AA seq
DB search
MNENAPTHKSSHKVKTHTPVSGYHIEDLRTYPTEKLLEIANKLKVENPQEFKRQDLMFEI
LKTQVTQGGYILFTGILEIMPDGYGFLRGFDGSFSDGHNDTYVSPSQIRRFALRNGDIVT
GQVRSPKDQEKYYALLKIEAINYLPSDEIKNRPLFDNLTPLFPDEQIKLEYEPTKVTGRM
LDLFSPVGKGQRALIVAPPRTGKTELMKELAQGITSNHPEVELIILLVDERPEEVTDMQR
SVKGQVFSSTFDLPANNHIRIAELVLERAKRRVEMGKDVVVLLDSITRLARAYNAVTPSS
GKVLSGGVDANALHRPKRFFGAARNIEEGGSLTIIATALIETGSRMDEVIFEEFKGTGNS
EIVLARNIADRRIYPAFDILKSGTRKDNILLGKDRLTKVWVLRNVMQQMDDIEALSFVYS
KMQQTKDNEEFLNLMNEK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaacgcgcctacgcacaaaagttcgcacaaagtcaaaacacacacgccagtg
agcggttatcacattgaagatttacgcacctaccctactgaaaagcttttagaaatcgct
aacaagctcaaagtggaaaacccccaagaattcaaacgacaagacttgatgtttgaaatt
ttaaaaacccaagtcacgcaaggcggatatattctttttaccgggattttagagatcatg
cctgatggctatggctttctaagagggtttgatgggagtttttcagacgggcataacgac
acatatgttagcccttctcaaatcaggcgttttgctttaaggaatggcgatattgttacc
ggtcaagtgcgatcccccaaagatcaagaaaaatactacgcccttttaaaaatagaagcc
atcaattatttgccttcagatgagattaaaaaccgccctttgtttgacaatctaaccccc
ctattcccggatgaacaaatcaaattagaatacgaacccactaaagttaccggcaggatg
ctggatttattcagccctgtggggaaaggtcaaagggctttgatcgttgcgccaccaaga
accgggaaaacggagctgatgaaagagctcgcccaaggcatcacttctaaccaccctgaa
gtggaattgattatccttttagtggatgagcgccctgaagaagttacggatatgcaacga
agcgttaagggtcaagtttttagctccacttttgatttgcccgccaataaccacataaga
atcgctgaattagtcttagaaagggcgaaaaggcgagtggaaatgggcaaagatgtggtg
gttttattagattctatcacccgtttagccagagcgtataacgctgtaacgccttcaagc
ggtaaggttttaagcgggggcgtggatgcgaacgccttgcacaggcccaagcgctttttt
ggagccgcaaggaatattgaagaaggcgggagcttgacgattatcgctacggcgttgatt
gaaacgggatctagaatggatgaggtgatttttgaagaatttaaaggcaccgggaatagc
gaaatcgttttagcgaggaatattgcggacaggcgcatttacccggcttttgatatttta
aaatccggcacacgaaaagacaatatcttgcttggcaaagaccgattgactaaagtgtgg
gttttaaggaatgtgatgcaacaaatggatgacatagaagccttaagctttgtgtattct
aaaatgcaacaaactaaggacaatgaggaatttttaaatttaatgaatgaaaaataa
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