Helicobacter pylori B8: HPB8_84
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Entry
HPB8_84 CDS
T01262
Symbol
thdF
Name
(GenBank) tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hpl
Helicobacter pylori B8
Brite
KEGG Orthology (KO) [BR:
hpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpl03016
]
HPB8_84 (thdF)
Transfer RNA biogenesis [BR:
hpl03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPB8_84 (thdF)
Prokaryotic type
Methyltransferases
HPB8_84 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
ABC_tran
iSTAND
Ras
cobW
Arf
MMR_HSR1_Xtn
AAA_29
nSTAND3
ATP_bind_1
AAA_15
Roc
ATP-synt_ab_N
Motif
Other DBs
NCBI-ProteinID:
CBI65641
UniProt:
D7FBT4
LinkDB
All DBs
Position
complement(88460..89845)
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AA seq
461 aa
AA seq
DB search
MKNTSSSTTSTMNDTIAAIATPLGKGAISIIKISGNNALNVLKQLTQKQDFTPRYAYVCD
IFSNGVLLDKALAIYFKAPYSFTGEDVCEIQCHGSPLLAQNILQACLNLGARLAKAGEFS
KKAFLNHKMDLSEIEASVQLILCEDESVLNALARQLKGELKIFIEEARGNLLKLLASSEV
LIDYSEEDIPSDFLNEVSLNLEKQIASFKDLLDFSNAQKQRNKGHALSIVGKPNAGKSSL
LNAMLLEERALVSDIKGTTRDTIEEVIELKGHKVRLIDTAGIRESADKIERLGIEKSLKS
LENCDIILGVFDLSKPLEKEDFNLIDTLNRAKKPCIVVLNKNDLVPKLELEILKSYLKIP
YSLLETNTLNSKACLKDLSQKISTFFPKLDTQNKLLLTSLAQKTALENAIFELQNAKNHL
ETLELFSYHLLSAIENLNLLTRPYETSQMLDSMFSEFCLGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacatcgtcatcaacgacttcaacaatgaatgacaccatcgccgctatcgct
acccctttaggcaagggagcgattagtatcattaaaatcagcggcaataacgctctaaat
gttctcaaacaactcacccaaaaacaagacttcacccccagatacgcttacgtgtgcgat
attttttctaatggtgttttattagacaaagcgttagctatttatttcaaagccccttat
agtttcaccggtgaagatgtgtgcgaaatccaatgccacggaagcccccttttagcgcaa
aatatcttacaagcttgtttgaatttaggggctaggcttgctaaagcgggggaatttagt
aaaaaagcctttttaaaccataaaatggatttgagcgagattgaagcgagcgttcagctc
atcctttgtgaagatgaaagcgttttaaacgctctagccaggcagcttaagggcgagtta
aaaatttttattgaagaagctagaggtaatcttttaaagcttttggcgagctcagaagtt
ttgattgattatagcgaagaagacattcctagcgattttttaaatgaagtatctcttaat
ttagaaaaacaaatcgcctcttttaaagacttattggatttttctaatgcgcaaaaacaa
aggaataaagggcatgccttaagcattgttggcaaacccaatgccggcaaaagttcttta
ttaaacgccatgcttttagaagaaagggctttagtgagcgatattaaaggcacaacaaga
gacaccatagaagaagtcattgaactaaaagggcataaggtgcgcctaattgataccgct
ggcattagagagagcgcggataaaatagagcgcttagggattgaaaaaagccttaaaagt
ttagaaaattgcgacattattttaggcgtgttcgatctttctaaacccctagaaaaagaa
gattttaaccttattgacaccctcaatcgcgctaaaaagccttgcattgttgttttgaat
aaaaacgatttagtgccaaaactggagcttgaaatcttaaaatcttaccttaaaatccct
tattctttactagaaaccaacaccctaaattccaaggcttgtttgaaagatttgagccaa
aaaatcagcacctttttccccaaactagacactcaaaacaagctcttactcacttcccta
gcccaaaaaaccgccctagaaaacgccatttttgaattgcaaaacgctaaaaaccattta
gaaactttagagcttttttcttatcatcttttaagcgcgatagaaaacttgaacttgctc
acccgcccttatgaaaccagccaaatgctagacagcatgtttagcgaattttgcttaggc
aaatga
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