Helicobacter pylori B8: HPB8_841
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Entry
HPB8_841 CDS
T01262
Symbol
papS
Name
(GenBank) Polynucleotide adenylyltransferase(PapS)
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hpl
Helicobacter pylori B8
Pathway
hpl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPB8_841 (papS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpl03019
]
HPB8_841 (papS)
Enzymes [BR:
hpl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HPB8_841 (papS)
Messenger RNA biogenesis [BR:
hpl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HPB8_841 (papS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CBI66398
UniProt:
D7FDZ1
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All DBs
Position
821374..822552
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AA seq
392 aa
AA seq
DB search
MFDIYEKSPHELYLVGGCVRDCLMGITPKDYDLTSNALVNESKELLLKRHFRVLETGIKH
GTITALKNHQSYEITTFRIEKGHIKHRKPKELVFSTRLTDDLKRRDFSMNAIAYSPTKGL
IDPFKGRSAIENQMIECVGGARLRFFEDALRILRALRFSATLGFKIAPSTKRAVFACKDL
LKHLSKERLQSELNKLLMGKNAYEVAKEYQEILELVTQEKIENLGFLKNAPFNLELRLLG
FFKHQKSLENLRYPKKTCVLFSKAKECHKAFLNIHNKTELKFLLKNYDLEPFNLALDFYA
LENPKHALKIKRLLKEIFDSNEPFKKEHLALKGNALQSLDYQHQQIGEILNACLNLVIAH
PKNNALEWLIKWVKDHYLPNDAINHSPIGRKN
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgacatttatgaaaaatcccctcatgagctttacttggtaggggggtgcgtgcgc
gattgtttgatgggcattacgcctaaagattacgatttaacctcaaacgctttagtcaat
gaaagcaaagagcttcttttaaagcgccattttagggtgctagaaaccggtatcaaacat
ggcacgatcacggctcttaaaaaccatcaaagctatgaaatcacaacttttagaattgaa
aaagggcatatcaagcaccgaaagcctaaagagttggtttttagcacacgtttaacagac
gatttaaagcggcgcgattttagcatgaatgcgatcgcttatagccctacaaaagggctg
attgatccttttaaagggcgaagcgcgattgaaaatcaaatgattgaatgcgtgggggga
gcgcgattgagattttttgaagacgctttaaggattttaagagcgttgcgatttagcgcg
actttaggctttaagatagcgccaagcaccaaaagagcggtttttgcgtgtaaggatttg
ttaaaacacctctccaaagagcgcttacaaagcgagttgaataagcttcttatggggaaa
aacgcctatgaagtggccaaagaatatcaagaaattttggagttggttactcaagaaaaa
atagaaaatttagggtttttaaaaaacgcgccttttaatttggaattaagattgttaggg
ttttttaaacatcaaaaaagtttggaaaatttacgctaccctaaaaaaacttgtgtttta
ttttccaaagctaaagaatgccataaagcttttttaaacattcataacaaaacagagtta
aaatttttattgaaaaactacgatttagagccttttaatttggctttagatttttatgcg
ttagaaaaccccaaacatgctttaaaaattaaaagattgttaaaagaaatctttgattct
aacgagccttttaaaaaagaacacctagcccttaagggcaacgcgctccaaagcttggac
taccagcaccaacaaatcggcgaaattttaaacgcatgcttaaatttagtcatcgctcac
cctaaaaacaacgctttagaatggctgataaaatgggttaaggatcattatttacctaat
gatgctataaaccattcgccaataggcagaaaaaattaa
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