Helicobacter pylori B8: HPB8_902
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Entry
HPB8_902 CDS
T01262
Symbol
gyrA
Name
(GenBank) DNA gyrase, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hpl
Helicobacter pylori B8
Brite
KEGG Orthology (KO) [BR:
hpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpl03032
]
HPB8_902 (gyrA)
03400 DNA repair and recombination proteins [BR:
hpl03400
]
HPB8_902 (gyrA)
Enzymes [BR:
hpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPB8_902 (gyrA)
DNA replication proteins [BR:
hpl03032
]
Prokaryotic type
DNA Topoisomerases
HPB8_902 (gyrA)
DNA repair and recombination proteins [BR:
hpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPB8_902 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
CBI66459
UniProt:
D7FE52
LinkDB
All DBs
Position
889801..892281
Genome browser
AA seq
826 aa
AA seq
DB search
MQDNLINETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRMDEIIDALMHVLENPNAALDEILEFVKGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAISEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRLFLNHR
KTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVQLIKTSPSPEAAKNALMERFSLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELIDDLNGILKSEDRLNGVVKTELLEVKEQ
FSSPRRTEIQESYESIDIEDLIANEPMVVSMSYKGYVKRVDLKAYEKQNRGGKGKLSGST
YEDDFIENFFVANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAIVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKNGVVKRTNLSEFGGNRSYSGIRAIVLDKGDELVGAKVVDNN
AKHLLIASHLGIFIKFPLEDVREIGRTTRGVRGIKLNENDFVVGAVVISDDSNKLLSVSE
NGLGKQTLAEAYREQSRGGKGVIGMKLTQKTGNLVGVISVDDENLDLMILTASAKMIRVS
IKDIRETGRNASGVKLINTADKVMYVNSCPKEEEPENLENSPAKFV
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataatttaatcaatgaaacaaaaaatattgtagaagtggggattgattcttct
attgaagagagctatttagcttattccatgagcgtgatcatagggcgtgctttaccggac
gctagagatggcttaaagcctgtgcataggcgtattttgtatgcgatgcatgaattaggc
cttacttccaaagtcgcttataaaaaaagcgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgataacgcggtttatgatgcgctagtgagaatggcgcaagatttt
tctatgcgtttggaattagtggatgggcagggcaactttggctctattgatggcgataac
gctgcagcgatgcgttacactgaagccagaatgaccaaggcgagtgaagaaattttaagg
gatattgataaagacaccattgattttgtgcctaattatgatgacaccttaaaagagcca
gatattttaccaagccgtctgcctaaccttttagtcaatggggctaatgggatcgctgta
gggatggcgacttctatcccccctcacaggatggatgaaatcatagacgctttaatgcat
gtcttagaaaaccctaacgctgcattagatgaaatcttagaatttgtcaaagggcctgac
tttcccaccggtgggatcatttatggcaaggcgggtattattgaagcctataaaacgggg
cgagggcgcgtgaaagtgcgggctaaagtgcatgtggaaaagacgaaaaataaagaaatc
atcgttttagatgaaatgccttttcaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaagcaaattgaaggcattagcgaagtgcgcgatgagagcgataga
gagggcattagagtggtgattgaattaaaaagagacgcaataagtgaaattgtcttaaac
cacctctacaaactcaccactatggagaccacttttagcattattttactcgctatttac
aataaagagcctaagattttcacgcttttagagttgttgcgccttttcttaaaccacaga
aaaaccattattataagacgcacgatttttgaattggaaaaggctaaggccagagcgcat
attttagagggctatttgatcgcactagacaatattgatgaaatcgtgcagctcattaaa
acaagcccaagcccagaagcggctaaaaacgccttaatggagcgttttagtttgagcgaa
atccaaagcaaagccattttagaaatgcgtttgcaacgcttaacaggccttgaaagagat
aaaatcaaagaagaataccaaaacttattagagcttattgatgatctcaatggcatttta
aagagcgaagatcgcttgaatggagtcgtcaaaacagagcttttagaagtcaaagagcaa
ttttcttctccaaggcgcactgaaattcaagaatcttatgaaagtattgacatagaagat
ttgatcgctaatgagcctatggtggtgagcatgagctataaaggctatgtgaaaagagtg
gatttaaaagcttatgaaaagcaaaatcgtggcggtaagggcaagctttcaggcagcact
tatgaagacgatttcattgaaaatttttttgtggctaacacgcatgatattttgctcttt
atcaccaataagggtcaattgtatcatttaaaagtctataaaatcccagaagcgagccgg
atcgctatgggtaaagctattgtgaatttaatttcgctcgctccggatgaaaaaatcatg
gcgactctaagcactaaagactttagcgatgaacgctctttagctttcttcacgaaaaat
ggcgtggtgaagcgcaccaatttgagcgaatttggcggtaataggagttatagcggtatc
agagcgattgttttagataaaggcgatgaattagtgggtgcaaaagttgtggataacaac
gccaagcatttgctcatcgcatcgcatttgggtattttcattaaattccctttagaagat
gtgcgcgagatcggaagaacgactcgtggggttagagggatcaagctgaatgaaaatgat
tttgttgtcggtgcggtcgttattagcgatgatagcaacaagcttttgagcgtgagcgag
aacgggcttggtaagcaaactttagccgaagcgtatagggagcaatctcgtggaggtaag
ggggtcattggcatgaagctcactcaaaaaaccggtaatttggtgggcgttatcagcgtg
gatgatgaaaacctggatttgatgattcttactgcgagcgcgaaaatgattagagtttct
attaaagacattagagaaaccggaagaaacgctagtggggtaaagctcataaacaccgcc
gataaagtcatgtatgtcaattcttgccctaaagaagaagagccagaaaatttagaaaac
tctcctgcaaaatttgtttga
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