Helicobacter pylori B8: HPB8_923
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Entry
HPB8_923 CDS
T01262
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hpl
Helicobacter pylori B8
Pathway
hpl03030
DNA replication
hpl03430
Mismatch repair
hpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPB8_923 (dnaX)
03430 Mismatch repair
HPB8_923 (dnaX)
03440 Homologous recombination
HPB8_923 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpl03032
]
HPB8_923 (dnaX)
03400 DNA repair and recombination proteins [BR:
hpl03400
]
HPB8_923 (dnaX)
Enzymes [BR:
hpl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPB8_923 (dnaX)
DNA replication proteins [BR:
hpl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPB8_923 (dnaX)
DNA repair and recombination proteins [BR:
hpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPB8_923 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
RCF1-5-like_lid
AAA_5
AAA_14
AAA_30
ResIII
DEAD
DNA_pol3_gamma3
TIP49
EH_Signature
AAA_assoc_2
AAA_lid_RFC1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CBI66480
UniProt:
D7FE73
LinkDB
All DBs
Position
complement(908664..910340)
Genome browser
AA seq
558 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCEEGPKAVPCDTCIQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYESSALEKLAHSGQGSLRDTITLLEQAINYCDNAITEGKVAEMLG
AIDRSVLEDFFQSLINQDEVRLKERYAILENYETESVLEEMMLFLKAKLLSPDSYSILLI
ERFFKIIMSSLSLLKEGANASFVLLLLKMKFKEALKLKALDDAILELEQSKENAFQPLNQ
NANAPKQEPKSAEKIEKLEKIESAETPQTPMLSAKDRIFHNLFKQVQTLVYERNYELGAV
FEKNIRFIDFDSQTKTLTWESLATNKDKELLRERFKIVKGIVDGVFGKGESIKIALKNQN
KSALEVVKEFKFPYSKPKPTTETTAETKEKEIQENDTKEVQETQPKQAPTALQEFMANNS
NLIEEIKSEFEIKSVELL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagctagtcggtcaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttcaggcaaaaccagctcttctaggatttttgctagggcttta
atgtgtgaagaagggccaaaagccgtgccttgcgatacttgcatccaatgccagagcgct
ttaaacaaccaccatatagatattatagaaatggatggagcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacccgctacaaaccaagctttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccaccgaagcgtttaacgcgcttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacggacgctttgaaattg
cccgctaccatactcagccgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaaccattttagaaaaagaacaagtgagctatgaaagtagcgcg
ttagaaaaactcgctcacagtgggcaagggagtttgagagacacgatcactcttttagag
caagccatcaattattgcgataacgctatcacagaaggcaaggtggctgaaatgttaggg
gcgattgaccgaagcgttttggaagattttttccaaagcttaatcaaccaagatgaagtg
cgattaaaagagcgttatgccattttagaaaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgattcttattctatccttttgata
gagcgcttttttaaaattatcatgagcagtttgagccttttgaaagaaggggcaaatgct
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaactcaaagcctta
gatgatgcgattttggaattagagcaaagcaaagaaaacgcttttcagcctttaaatcaa
aacgctaatgctcctaaacaagaacctaaaagtgcagagaaaatagaaaagctagaaaaa
atagagagcgcagaaaccccgcaaactcccatgctttcagctaaagatcgcatttttcac
aaccttttcaagcaagttcaaacattggtttatgagcgcaattatgaattaggggcggtg
tttgaaaaaaatatccgtttcattgattttgacagccagactaaaaccttgacttgggag
tctttagccaccaataaagataaagagcttttaagagaacgatttaaaatcgtgaaaggt
atcgttgatggggtttttggcaagggcgaaagtatcaaaatcgctttaaaaaatcaaaat
aaaagcgctttagaagtggttaaagagtttaaattcccttattcaaagcccaaaccaacc
accgaaaccacggctgaaactaaagaaaaagagattcaagaaaacgacactaaagaggtt
caagaaacccaaccaaaacaagcccctacagccttgcaagaattcatggctaacaattcc
aatctcattgaagagattaagagcgagtttgaaatcaaaagcgtggaattgttatga
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