Helicobacter pylori SJM180: HPSJM_00050
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Entry
HPSJM_00050 CDS
T01323
Name
(GenBank) putative Outer membrane protein
KO
K15845
outer membrane protein HopZ
Organism
hpm
Helicobacter pylori SJM180
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SabA_adhesion
HP_OMP
EspB_PPE
Rif1_N
Motif
Other DBs
NCBI-ProteinID:
ADO01622
LinkDB
All DBs
Position
complement(5396..7285)
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AA seq
629 aa
AA seq
DB search
MKNTGELKKLSDTYENLSNLLTNFNNLNQAVTNASSPSEINAAIDNLKANTQGLIGEKTN
SPAYQAVSLALNAAVGLWNVIAYNVQCGPGNSGQASVIFDGQPGHNSSSINCNLTGYNNG
VSGPLSIENMKKLNDAYQAIQQALKQDSGFPILDSAGKQVTITITTQTNGQTSKETTTTT
NDAQNLLQEASKMIGVLTKNCPWVNHNQGQNGGAPWGLNTSGNVCQVFATEFSAVTSMIK
NAQEIVAQAQSLNQQSNQNAPQDFNPYTSADRAFAQNMLNHAQAQAKMLELADQMKKDLD
TIPSQFVSNYLAACRNGGGTLPNEGVTNNTWGAGCAYVEETITALNNSLVHFGTQAEQIK
QSELLARTILDFRGSLSTLNNTYNSITTTASNTPNSPFLKNLISQSTNPNNPGGLQTVYQ
VNQSAYSQLLSATQELGHNPFRRVGLISSQTNNGAMNGIGVQVGYKQFFGEKRRWGLRYY
GFFDYNHAYIKSSFFNSASDVFTYGVGTDVLYNFINDKATKNNKISFGVFGGIALAGTSW
LNSQYVNLATFNNFYSAKMNVANFQFLFNLGLRMNLAKNKKKASDHAAQHGVELGVKIPT
INTNYYSLLGTQLQYRRLYSVYLNYVFAY
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaccggcgaattgaaaaaactttcagacacttatgagaatttgagcaacctt
ttaaccaattttaacaacctcaatcaggcggtaacgaacgcgagcagcccttcagaaatc
aatgctgcgatcgataatttaaaagcaaacacgcaagggctaattggcgaaaaaaccaat
tccccggcgtatcaagccgtctctttggcgttgaatgcggcggtggggctgtggaatgtg
atcgcctataatgtccaatgcggtcctggtaatagtgggcaagcaagcgtaatttttgat
ggccaaccaggacacaattcaagctccattaattgcaatttaaccggttataacaacggg
gttagcggccctttaagcattgagaacatgaaaaagcttaacgacgcttatcaagctatc
caacaggctttaaaacaagatagcggatttcctattttggatagtgcaggaaaacaagta
actataaccataacaacgcaaactaatgggcaaactagtaaggaaactactactactact
aatgacgcgcaaaatcttttgcaagaagccagtaaaatgataggcgttctcactaaaaac
tgcccatgggtcaatcacaatcaaggacaaaatggaggggcgccgtggggtttaaatacg
tcagggaacgtgtgtcaggtttttgccacggagtttagcgccgttactagcatgatcaaa
aacgcccaagaaatcgtcgcgcaagctcaaagccttaaccaacaaagcaatcaaaacgcg
ccgcaagatttcaatccttacacttctgctgatagggctttcgctcaaaacatgctcaat
cacgcgcaagcgcaagccaagatgcttgaactagccgatcaaatgaaaaaagaccttgac
actatcccaagccaatttgtatcaaattacttggcagcttgccgcaatgggggcggcaca
ttacctaatgaaggggttactaacaacacttggggagcgggttgcgcgtatgtggaagag
acgataaccgccctaaataacagccttgtgcattttggcactcaagccgagcagatcaag
caatctgagttgttggcgcgcacgatacttgattttagaggcagccttagcactttaaac
aacacttataacagcatcaccacgaccgcttcaaacacgcccaattccccattccttaaa
aatttgataagccaatccactaaccctaataaccctgggggcttacagaccgtttatcaa
gtcaaccaaagcgcttattcgcaattattaagcgccacgcaagaattagggcataaccct
ttcagacgcgttggattaatcagctctcaaaccaacaatggtgccatgaatgggatcggc
gtgcaagtgggctacaagcaattttttggtgaaaaaagaaggtggggattaaggtattac
ggcttttttgattacaaccatgcttatatcaaatccagctttttcaattcggcttctgat
gtgttcacttatggggtagggacagatgtcctctataactttatcaatgataaagccacc
aaaaacaataagatttcttttggggtgtttgggggtattgcgttagccggcacttcgtgg
ctgaattcccagtatgtgaatttagcaaccttcaataatttctatagcgctaaaatgaat
gtggcgaatttccaattcttattcaacttgggcttgagaatgaacctcgctaaaaacaaa
aagaaagcgagcgatcatgccgctcagcatggcgtggaattgggcgtgaagatccccacg
atcaacacgaattactattctttgctaggcactcaactccaataccgaagattgtatagc
gtgtatttgaattatgtgtttgcgtattaa
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