Helicobacter pylori SJM180: HPSJM_01000
Help
Entry
HPSJM_01000 CDS
T01323
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPSJM_01000 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpm01007
]
HPSJM_01000 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpm03016
]
HPSJM_01000 (lysS)
Enzymes [BR:
hpm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HPSJM_01000 (lysS)
Amino acid related enzymes [BR:
hpm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HPSJM_01000 (lysS)
Transfer RNA biogenesis [BR:
hpm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HPSJM_01000 (lysS)
Prokaryotic type
Other AARSs
HPSJM_01000 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ADO01799
LinkDB
All DBs
Position
190043..191548
Genome browser
AA seq
501 aa
AA seq
DB search
MFSNQYIQQRIHKANSLREEGKNPYQNGLKRSLTNAAFLEKYAYVKGLEEPKDKEKCESI
VGRVKLLRLMGKACFIKVEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVEGFPFAT
KTGELSIHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIV
SSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEVERYLRIAPELYLKRLIVGG
FEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKI
IYNDMEVDFNQTSVISYLDALETIGGISKDILEKEDRLLAYLLERGVKVEPNLTHGKLLA
EAFDHFVEHKLINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDP
LDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIK
DVILFPAMRPVKNDFNIESGE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaaccaatacatccaacaacgcatccataaagccaatagcttgagagaagaa
gggaaaaacccttatcaaaatggcttgaaacgaagcctcactaatgctgcttttttagaa
aaatacgcttatgttaagggtttagaagagcctaaagacaaagaaaaatgcgaaagtatt
gtagggagagtcaagcttttgcgtttaatgggtaaggcatgttttattaaagttgaagat
gaaagtgcgattttgcaagcttatgtttcgcaaaatgaattgaacgatgagtttaaaagc
ttgaaaaagcatttagaagtgggcgatattgtgttggtggaaggtttcccttttgctacc
aaaaccggtgaattaagcattcatgccctagaatttcatattttaagcaaaaccattgtg
cctttacctgaaaagtttcatggattgagcgatatagaattgcgttaccgccagcgctac
ttggatttgatcgtcaatcctagcgttaaagatgtgtttaaaaagcgcagtttgattgtc
tctagcgtgcggaaattctttgaaatggaagggtttttggaagtggaaacccccatgatg
caccccattcctggcggagcgaacgcaaggccttttatcacttatcataacgctttagag
gtggagaggtatttaagaatcgctccagaattatacctcaaacgcttgattgtagggggg
tttgaagcggtgtttgaaatcaatcgtaatttcaggaatgagggcatggatcacagccat
aaccccgaatttacgatgattgaattttattgggcgtatcacacttatgaagatttgatt
gaactcagtaagagactatttgactacttgctaaagactttaaatttggattcaaaaatc
atctataacgatatggaagtggatttcaaccaaacgagcgtgatttcctatttggacgct
ttagaaacaatagggggcattagtaaggatattttggaaaaagaagacaggcttttggct
tatttgttagagcgaggtgttaaagtagagcccaatctcactcatggtaaattgctcgct
gaagcgtttgatcattttgtagagcataagctcattaaccccacttttgtaacccaatac
cctattgagattagccccttagccagacgcaacgatagtaaccctaatattgctgacagg
tttgaattgttcattgcaggaaaagaaatcgctaacggctttagcgagttgaacgatcct
ttagatcaactagagcgctttaaaaatcaagtggctgagaaagaaaaaggcgatgaagaa
gcccaatacatggatgaagattatgtgtgggccctagcccatggaatgccccccactgca
gggcaaggcataggcattgacaggttagtgatgttactcactggagctaaaagcattaaa
gatgtgattttattcccagcgatgcgtcctgttaaaaacgattttaatattgagagtgga
gaataa
DBGET
integrated database retrieval system
