Helicobacter pylori SJM180: HPSJM_01005
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Entry
HPSJM_01005 CDS
T01323
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm00260
Glycine, serine and threonine metabolism
hpm00460
Cyanoamino acid metabolism
hpm00630
Glyoxylate and dicarboxylate metabolism
hpm00670
One carbon pool by folate
hpm00680
Methane metabolism
hpm01100
Metabolic pathways
hpm01110
Biosynthesis of secondary metabolites
hpm01120
Microbial metabolism in diverse environments
hpm01200
Carbon metabolism
hpm01230
Biosynthesis of amino acids
hpm01240
Biosynthesis of cofactors
hpm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPSJM_01005
09102 Energy metabolism
00680 Methane metabolism
HPSJM_01005
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HPSJM_01005
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HPSJM_01005
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HPSJM_01005
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HPSJM_01005
Enzymes [BR:
hpm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HPSJM_01005
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ADO01800
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Position
191548..192798
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AA seq
416 aa
AA seq
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MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFPSVMEAMGSILTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCQFANVQAHSGSQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVGLDGYIDYEEVLKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVTGEHAHPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHVIAAKAVGFKENLKPEFKAYAKLVKSNMQVLAKTLKEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKAMANQFPVYQQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggatagtgaaatttttgaattgatctttgaagaatat
aagcggcaaaatgagcatttagaaatgatagcgagcgagaattacacttttcctagtgtt
atggaggctatggggagcattttaacgaataaatacgctgagggctatcctaacaagcgc
tattatggaggctgtgaagtggtggataaaatagaaagcctagccatagaaagggctaaa
aagctttttaattgccagttcgctaatgtgcaagcgcattcaggctcacaagctaataac
gctgtctatcacgcccttttaaagccttatgataagattttaggcatggatttaagctgt
ggagggcatttaacgcatggcgctaaagtgagtttaaccggcaagcattatcagagcttt
tcttatggcgtgggtttggatggttatattgattatgaagaagtgctaaaaatcgctcag
agcgttaagccagaaatcattgtgtgcgggttttcagcctatccaagggagattgatttt
aagaaatttagggaaatcgctgatgaagtgggggcgttactactaggcgatatagcccat
gtggcgggacttgttgtaaccggtgagcatgcccatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagaggggggcttattttaaccaatgat
gaagagatagcggctaagattgataaagcgatttttccagggactcaaggcgggcctttg
atgcatgtgattgctgctaaagcggtggggtttaaagagaatctaaaaccagaatttaaa
gcttatgcaaaattagtgaaatctaacatgcaagttctcgctaaaacattaaaagaaaaa
aaccataagttagtgagcggtggcacttctaaccatttgcttttaatggatttcttggat
aagccttatagcgggaaagacgctgatattgccttagggaatgccggaatcaccgtgaat
aaaaacaccattcctggcgaaacgcgcagcccttttgtaacgagtgggataaggattggc
tcagcggcattgagtgcaaggggcatgggagctaaggaatttgaaatcatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaggccatggccaatcaattccctgtgtaccaacaacctattttttaa
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