Helicobacter pylori SJM180: HPSJM_01040
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Entry
HPSJM_01040 CDS
T01323
Symbol
frdB
Name
(GenBank) fumarate reductase iron-sulfur subunit
KO
K25995
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm00020
Citrate cycle (TCA cycle)
hpm00190
Oxidative phosphorylation
hpm00620
Pyruvate metabolism
hpm00650
Butanoate metabolism
hpm00720
Other carbon fixation pathways
hpm01100
Metabolic pathways
hpm01110
Biosynthesis of secondary metabolites
hpm01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HPSJM_01040 (frdB)
00620 Pyruvate metabolism
HPSJM_01040 (frdB)
00650 Butanoate metabolism
HPSJM_01040 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
HPSJM_01040 (frdB)
00720 Other carbon fixation pathways
HPSJM_01040 (frdB)
Enzymes [BR:
hpm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HPSJM_01040 (frdB)
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
HPSJM_01040 (frdB)
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Ortholog
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Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_16
Fer2
Fer4_9
Silic_transp
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
ADO01807
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All DBs
Position
complement(198501..199238)
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AA seq
245 aa
AA seq
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MSDSERTIVVRVLKFDPQSAVSKPHFKEYQLKETPSMTLFIALNLIREHQDPDLSFDFVC
RAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKR
VESWAHSKEEVDITKPEKRIEPDEAQEVFELDRCIECGCCIASCGTKLMRPNFIGAAGMN
RAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLRNRMLK
VGKSR
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatagtgaacgaacgattgtagtcagagtgctaaaatttgaccctcaaagcgcg
gtgagtaagccgcattttaaagagtatcaattgaaagaaacgccatccatgacgctcttt
atcgctttaaacctcattagagagcatcaggatccggatttgagctttgattttgtgtgc
cgcgctgggatttgcggctcttgcgcgatgatggttaatgggagaccgagactggcttgt
aaaaccctaacttctagctttgaaagtggggtgattacactcatgcccatgcccagtttt
acgctcattaaagatttgagcgtgaacaccggcgattggtttttagatatgactaaaagg
gtggagagttgggcgcattctaaagaagaagtggatattactaagccggaaaaaaggatt
gaacctgatgaagcccaagaagtctttgaactagacaggtgtattgaatgcgggtgctgt
atcgcttcttgcgggactaaactcatgcgccctaatttcattggagctgctggcatgaac
agagccatgcgtttcatgattgacagccacgatgaaagaagcgatgacgatttttatgaa
ttagtcggcgatgatgatggcgtttttgggtgcatgagcttgattgcttgccatgacact
tgccctaaagaattacccttgcaaagcagtatcgctactttgcgtaataggatgttgaaa
gtgggtaaaagccgctaa
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