Helicobacter pylori SJM180: HPSJM_01700
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Entry
HPSJM_01700 CDS
T01323
Name
(GenBank) outer membrane protein BabA
KO
K15847
outer membrane protein BabA
Organism
hpm
Helicobacter pylori SJM180
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SabA_adhesion
HP_OMP
RmuC
Baculo_F
Motif
Other DBs
NCBI-ProteinID:
ADO01936
LinkDB
All DBs
Position
complement(332496..334739)
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AA seq
747 aa
AA seq
DB search
MKKHILSLALGSLLVSTLSAEDDGFYVSAGYQIGEAAQMVTNTKGIQQLSDNYENLSKLL
TRYSTLTNLIRLSSDPSAINTARENLGASAKNLIGDTKNSPAYQAVLLAINAAVGFWNVL
GYATQCGGNGNQTSTSSTTIFNNEPGYRSTSITCGYNNLGIGREGVMSIDNMKKINEAYQ
ILQTALKKGLSALKENNGTVDVTYTYTCSGEGNNNCNPSLLGIKGTSENSDGRNGGSITK
TQTIDGKTVSTTISSKVVNSTAPGNTSGVSYTEITNKLDGVPDNAQALLAQASTLINTIN
SACPWFHVTNKDGGPQMNPTSGGLCVFKDEISAIQKMITDAQELVNQTSVINSHEQSTPV
GGSGGKPFNPYTDASFAQGMLANASAQAKMLNLAHQVGQAINPENLSGTFKNFVTDFLAT
CNNPSTAGTGGTQGSPSGTVTTQTFASGCAYVEQTITNLTNSIAHFGTQEQQIQQAENIA
DTLVHFKSRYSELGNTYNSITTALSSVPNAQSLQNVVSKKNNPYSPQGIETNYYLNQNAY
NQIQTINQELGRNPFRKLGIVSSQTNNGAMNGIGIQVGYKQFFGQKRKWGARYYGFFDYN
HAFIKSSFFNSASDVWTYGFGADALYNFINDKATNFLGKNNKLSVGLFGGIALAGTSWLN
SEYVNLATVNNVYNAKMNVANFQFLFNMGVRMNLARSKKKDSDHAAQHGIELGVKIPTIN
TNYYSFMGAELKYRRLYSVYLNYVFAY
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacacatcctttcattagctttaggctcgcttttagtttccactttgagcgct
gaagacgacggcttttacgtgagtgcgggctatcaaatcggtgaagccgctcaaatggta
accaacaccaaaggcatccaacagctttcagacaattatgaaaacttgagcaagctttta
accagatacagcaccttaaccaaccttatccgattatcctctgatccaagcgcgatcaat
acggcgcgtgaaaatctgggcgcgagcgcgaagaatttgatcggcgataccaaaaattcc
ccggcgtatcaggccgtgcttttagcgatcaacgcggcggtggggttttggaatgtctta
ggctatgccacgcaatgcgggggtaatggtaatcaaacaagcacctcttcaaccaccatc
ttcaacaacgagccagggtatcgatccacttccatcacttgcgggtataacaacctgggc
attggaagagagggcgttatgagtattgataacatgaaaaagattaacgaagcctatcag
attctccaaacggcgttaaagaaaggcttatccgcgctcaaagaaaacaacgggacggtt
gatgtaacctatacttacacatgctcaggggaagggaataataactgcaatccgtcacta
ttgggtataaagggcacctccgaaaatagcgacgggcgaaatggcggaagcataactaaa
acccaaaccatagacggcaaaaccgtgagcaccacgatcagttcaaaagttgttaatagc
actgcacctggcaacacatcaggtgtctcctacaccgaaatcaccaacaaattagatggt
gtgcctgataacgctcaagcgctcttagcgcaagcgagcacgctcatcaacaccatcaac
agcgcatgcccatggtttcatgtaactaataaagatggtggcccacagatgaacccgact
tcagggggtttgtgcgtttttaaagatgaaatcagcgcgatccaaaagatgatcacggac
gcgcaagagctggtcaaccaaacgagcgtcattaacagccatgaacaatcaaccccggtg
ggaggcagtgggggcaagcctttcaacccctacacagacgcaagctttgcgcaaggcatg
ctcgctaacgctagcgcgcaagccaaaatgctcaatttagcccatcaagtggggcaagcc
attaaccctgaaaatcttagcgggacttttaaaaattttgttacagactttttagccaca
tgcaacaacccctcaacagctggcactggtggcacacaaggttcaccttctggcacagtt
accactcaaactttcgcttccggttgcgcctatgtggagcaaaccataacgaatttaacc
aacagcatcgcgcattttggcactcaagagcagcaaatacagcaagccgaaaacatcgct
gacactctagtgcatttcaaatctagatacagcgaattgggcaacacttataacagcatc
accaccgcgctatctagtgttcctaacgctcaatctttgcaaaatgtggtgagcaaaaag
aacaacccctacagcccgcaaggcatagaaaccaattactacttgaatcaaaacgcttac
aaccaaatccaaacgattaaccaagaattagggcgtaacccctttaggaaattgggcatc
gtcagctctcaaaccaacaacggcgcgatgaatgggatcggtatccaagtgggctacaag
caattctttggccaaaaaagaaagtggggcgctaggtattacggcttttttgattacaac
catgcgttcatcaaatccagcttcttcaactcggcttctgatgtatggacttatggcttt
ggagcagacgctctctataacttcatcaacgataaagccaccaatttcttaggcaagaac
aacaagctctcagtagggctttttggcgggattgcgttagcgggcacttcatggcttaat
tctgagtatgtgaatttagccaccgtgaataacgtctataacgctaaaatgaatgtggcg
aacttccaattcttattcaacatgggagtgagaatgaatttagccaggtccaagaaaaaa
gacagcgatcatgcagctcagcatggcattgaactaggcgtgaaaatccccaccatcaac
acgaactactattccttcatgggggctgaactcaaataccgcaggctttatagcgtgtat
ttgaattacgtgttcgcttactag
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