Helicobacter pylori SJM180: HPSJM_01825
Help
Entry
HPSJM_01825 CDS
T01323
Name
(GenBank) single-stranded-DNA specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm03410
Base excision repair
hpm03430
Mismatch repair
hpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPSJM_01825
03430 Mismatch repair
HPSJM_01825
03440 Homologous recombination
HPSJM_01825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpm03400
]
HPSJM_01825
DNA repair and recombination proteins [BR:
hpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HPSJM_01825
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPSJM_01825
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HPSJM_01825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Fe-S_biosyn
GLUCM-like_C
Motif
Other DBs
NCBI-ProteinID:
ADO01961
LinkDB
All DBs
Position
complement(352539..354089)
Genome browser
AA seq
516 aa
AA seq
DB search
MKQKLKAQIKERVASIAYNEKGFPSPFLFKDLKKAALKIIEAMRANTEILVVGDYDADGV
ISSAIMAKFFESLNYKHVRIAIPNRFIDGYGISKKFLEKHHAPLIITVDNGINAFEAAQF
CKEKNYTLIITDHHCLNNDEIPDAYAVINPKQPDCDFIQKEVCGALVAFYLCYGIHQLLG
KEKSRSSELLCLAGVATIADMMPLTFFNRFLVSKALYFLQKESLGAMGFLRQREVFRKRS
LKASDISFSIAPLINSAGRMQDAKMALDFLSANNFQDGYSLYERLKACNLKRKMIQQQVF
EEAFKHAMVGEKIIVAFKDNWHEGVLGIVASKLVEATQKPSLVFTFKEGVYKGSARSSSN
IDLIDALNGVSSLLLGYGGHRQACGLSVGKNNIVSLFETLENFDFKVLPFCEKEPPLTLK
LKDIDRELLEIIEMGEPYGQENPEPLFQVQNLEVIEEKIIKESHQILRFKDKECVKEAIY
FNADRFLKAGEKVSVLFSVELDECSNEPKMFVKSLL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaagcttaaagctcaaatcaaagagcgagtggcttctatcgcctataatgaa
aaagggtttcctagcccctttttatttaaagacttgaaaaaagccgcactcaaaatcata
gaagccatgcgtgcaaacacagaaattttagtggtgggcgattatgacgctgacggcgtg
attagctctgctatcatggcaaaattctttgaaagcctgaactataagcatgttcgcatt
gcaatccctaatcgcttcattgatggttatgggatttctaaaaagtttttagaaaaacac
cacgcccctttaatcatcacggtggataacgggattaacgcctttgaagccgctcaattt
tgcaaggaaaaaaactacaccctaatcatcaccgatcaccattgcttaaataatgatgaa
atcccagacgcttatgcggtgatcaaccccaagcaaccggattgtgattttatccaaaag
gaagtgtgcggggcgttggtggcgttttatttgtgctatggtatccaccaacttttagga
aaagaaaaaagccgttctagtgagttattatgcttagcgggcgtggcgactattgctgat
atgatgcctttgactttttttaaccgctttttagtttctaaagccttgtattttttgcaa
aaagaatccttaggggcgatggggtttttacgccaaagagaagtttttagaaaacgctct
ttaaaagcgagcgatatttcttttagtatcgcccctttaatcaactccgcagggcgcatg
caagacgctaaaatggctttagattttttaagcgcgaataattttcaagatggctattct
ttgtatgaacgcttgaaagcatgcaatttgaagcgtaaaatgatccaacagcaggttttt
gaagaagcctttaagcatgcgatggttggagaaaaaatcatcgtcgcttttaaggataat
tggcatgagggcgtgctggggatcgtggcttcaaaattagtggaagccactcaaaagcca
agcctggttttcacctttaaagaaggggtgtataaagggagcgctcgtagctcttcaaat
attgacttgattgacgctttgaatggggtttcttctttgttgctcggctatggagggcat
aggcaagcttgcggtttgagcgttggaaaaaacaatatcgtctcgctctttgaaacttta
gaaaattttgattttaaagtcttgcctttttgtgaaaaagaaccccctttaacgctcaaa
ttaaaagatattgacagagagcttttagagattatagaaatgggcgaaccttatgggcaa
gaaaaccctgagcctttattccaagtgcaaaatttagaagtcatagaagaaaaaatcatt
aaagaaagccaccaaattctgcgttttaaggataaagaatgcgttaaagaggctatttat
tttaacgctgatcggtttttgaaagcgggcgaaaaggtgagcgtgctttttagcgtggaa
ttagatgagtgttctaatgagcctaaaatgtttgttaaaagtttgttgtag
DBGET
integrated database retrieval system
