KEGG   Helicobacter pylori SJM180: HPSJM_01915
Entry
HPSJM_01915       CDS       T01323                                 
Name
(GenBank) Pore-forming cytolysin
  KO
K06442  23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
Organism
hpm  Helicobacter pylori SJM180
Brite
KEGG Orthology (KO) [BR:hpm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hpm03009]
    HPSJM_01915
Enzymes [BR:hpm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.226  23S rRNA (cytidine1920-2'-O)-methyltransferase
     HPSJM_01915
    2.1.1.227  16S rRNA (cytidine1409-2'-O)-methyltransferase
     HPSJM_01915
Ribosome biogenesis [BR:hpm03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    HPSJM_01915
   23S rRNA modification factors
    HPSJM_01915
SSDB
Motif
Pfam: FtsJ S4 PrmA Methyltransf_25 Methyltransf_31 ThiS Methyltransf_9
Other DBs
NCBI-ProteinID: ADO01979
LinkDB
Position
complement(375571..376278)
AA seq 235 aa
MRLDYALFNQHLANSREKAKALVLKNQVLVNKIVVSKPSFIIKEGDQIELIAPNLFVSRA
GEKLGAFLENHFIDFKEKVVLDVGASKGGFSQVALLKGAKKVLCVDVGKMQLDESLKNDQ
RIECYEECDIRGFKTPEKIDLVLCDVSFISLYCILEAILPLSDEFLALFKPQFEVGRATK
RNKKGVVMDKEAILNALENFKNHLKTKDFQILKIQESLVKGKNGNVEFFIHFKRA
NT seq 708 nt   +upstreamnt  +downstreamnt
atgcgcttagattatgccctattcaaccagcatttagcaaatagcagagaaaaagctaaa
gcgttggttttaaaaaatcaggttttagtcaataaaatagtggtttctaaaccctctttt
atcattaaagagggtgatcaaattgaactcatcgctccaaatctattcgttagcagggct
ggggaaaaattaggggcttttttagaaaatcactttatagattttaaagaaaaggttgtt
ttagatgtgggagcgagtaagggaggctttagtcaagtggctcttttaaaaggggctaaa
aaggtgctttgcgtggatgtggggaaaatgcaattagatgagagtttgaaaaacgaccag
cgcatagaatgttacgaagaatgcgatattagagggtttaaaacgccagaaaaaattgat
ttagtgctttgtgatgtgagttttatttctttatattgtattttagaagcgattttgcct
ttaagcgatgaatttttggcgcttttcaaaccgcaatttgaagtgggcagagcgacaaaa
cgcaataaaaagggggtggtaatggataaagaagccattttaaacgctttagaaaacttt
aaaaaccatttaaaaacaaaggattttcaaatcttaaagatccaagaaagcttagtgaaa
gggaaaaacgggaatgttgaattttttatccatttcaagcgagcctga

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