Helicobacter pylori SJM180: HPSJM_02225
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Entry
HPSJM_02225 CDS
T01323
Name
(GenBank) recombination factor protein RarA
KO
K07478
putative ATPase
Organism
hpm
Helicobacter pylori SJM180
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
HPSJM_02225
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MgsA_C
RuvB_N
AAA
AAA_assoc_2
AAA_14
AAA_5
AAA_16
AAA_22
AAA_18
AAA_2
RNA_helicase
nSTAND3
ATPase_2
AAA_17
Sigma54_activ_2
Mg_chelatase
NPHP3_N
NACHT
AAA_28
ABC_tran
NB-ARC
Viral_helicase1
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ADO02041
LinkDB
All DBs
Position
complement(431184..432359)
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AA seq
391 aa
AA seq
DB search
MSLTSLLNPKSLEDFLGQEHLIGKDAPLFKALQSKHFPHAFFYGPPGVGKTSLAQIIARS
LERPILSFNATDFKLEDLRLKLKNYQNTLLKPVVFIDETHRLNKTQQEFLLPIMEKNHAL
ILGASTQDPNYSLSHAIRSRSFIFELTPLNKSDLDKLCTKALALLKKQIEPDAKTYLLNN
SAGDARALLNLLDLSAKIEDPITLKTLQSLRPHSLNDGSYSDDTHYNLTSALIKSLRGSD
ENASIYYLARLIAGGENPEFIARRLVVFASEDIGNANPNALNLASSCLFSVKQIGYPEAR
IILSQCVIYLACSPKSNTAYRAINQALDCVQKGSLYPIPKHLLPNAKDYLYPHDYNGYVK
QDYLEKPLNLVSSQGIGFEKTLLEWLDKIRN
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgacttcgcttttaaacccaaaaagcctagaagattttttaggccaagagcat
ttaatagggaaagacgcccccttatttaaagccttacaatccaaacacttcccccatgcc
tttttctatggccctcctggcgtgggtaaaacaagcctagctcaaatcatagctcgctcc
ctagagcgccccattctttcatttaatgcgacagattttaagctagaggatttgcgcctt
aagcttaaaaattaccaaaacacccttttaaaacccgttgtttttattgatgaaacccac
agattgaataaaacccaacaggaatttttactccccattatggaaaaaaatcacgcttta
atcttaggggctagcacgcaagatcctaattacagcctaagccatgcgatccgctcaaga
agttttatttttgaattaacccccctaaacaagagcgatttagacaagctttgcactaag
gctttagcattgctcaaaaaacaaatagagcctgacgctaaaacctaccttttaaacaac
agcgctggcgatgctagagcgttactaaaccttttagatttgagcgctaaaatagaagat
cctatcactttaaaaaccttgcaatccttacggccccatagcctaaatgacggatcttat
agcgatgatacgcattataacctcactagcgcattaatcaaatctttaagagggagcgat
gaaaacgcctccatttattatctggcacgcttgattgctggcggggaaaacccggaattt
atcgccagaaggctggtggtttttgcgagcgaagatattggtaacgctaacccaaacgcc
cttaatttagcctcttcttgcttgttttcagtcaaacaaatcggctaccctgaagcgcgc
atcattttaagccaatgcgtgatttatctggcttgttcgcccaagtctaacacggcttat
agagcgatcaatcaggccttagattgcgttcaaaaaggctcactctaccctattcctaaa
cacctgctacctaacgctaaagactacctttacccgcatgattataacggctatgtcaaa
caagattatttagaaaaacccctcaatttggtttcttctcaaggcatagggtttgaaaaa
acccttttagaatggcttgataagataagaaattga
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