Helicobacter pylori SJM180: HPSJM_02475
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Entry
HPSJM_02475 CDS
T01323
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm00470
D-Amino acid metabolism
hpm00550
Peptidoglycan biosynthesis
hpm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPSJM_02475 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPSJM_02475 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpm01011
]
HPSJM_02475 (murD)
Enzymes [BR:
hpm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HPSJM_02475 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpm01011
]
Precursor biosynthesis
Amino acid ligase
HPSJM_02475 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
DUF3531
Motif
Other DBs
NCBI-ProteinID:
ADO02091
UniProt:
E1PYV0
LinkDB
All DBs
Position
488556..489824
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AA seq
422 aa
AA seq
DB search
MKISLLGHGKTTLALGRFFKKNHNEVKFFDDKFTAFFKDSEGFLCYPSKDFNPNNSQLEI
VSPGISFTHPLVIKAKHLMSEYDYIDSLFDHSFTPTMISISGTNGKTTTTEMLTALLEDF
KAVSGGNIGTPLIELFEKQSPLWVLETSSFSLHYTNKAYPLIYLLINVEADHLTWHCNFE
NYLDAKLKVLSLMPKTSLAILPLKFKEHSSVQNSQAQKIFFDTSEEVLERLEIPSNALFF
KGAFLLDAALALLVYEQFLKIKNLKWQDYRENALKRLNAFKIGSHKMEEFKDKEGRLWVD
DSKATNIDATLQALKTFKNQKIHLILGGDIKGVNLTPLFEEFKNYKISLYAIGSSASIIQ
ALALEFNVSCQVCLKLEKAVQEIKSVLLQNEVALLSPSAASLDQFSSYKERGEKFKAFVL
KD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctctttattggggcatggtaaaaccactctagccctagggcgtttttttaaa
aaaaaccataacgaagtcaaattttttgatgataaattcactgcattttttaaggatagt
gagggttttctttgctatcccagtaaggattttaaccctaataattcccaactagaaata
gtcagtccgggcattagtttcacgcaccctttagtcataaaagccaagcatttaatgagc
gaatacgattatattgatagtttgtttgatcattctttcacgcctacgatgataagtatt
agcggcactaatggtaaaaccaccacgacagaaatgctcactgcgcttttagaagatttt
aaggctgtgagtggggggaatatcggcacgcccttgattgaattgtttgaaaagcaatcg
cccttgtgggtgctagaaacaagctctttttctttgcattacactaacaaggcttaccct
ttaatctacttgctcatcaatgtggaagctgatcatttgacttggcattgcaattttgaa
aattatttggacgctaaactcaaggttttatcgttgatgcctaaaacttcgctcgctatc
ctccctttaaaattcaaagaacattcaagcgttcaaaactcgcaagcgcaaaaaatcttt
tttgacacaagcgaagaggttttagagcgtttagaaatcccttctaacgctctttttttt
aagggagcgtttttattagacgctgccttagcccttttagtttatgagcaatttttaaaa
ataaagaatttaaaatggcaagattatagagaaaacgcccttaaaagactgaacgctttt
aagattggctcgcataaaatggaagaatttaaggataaagaagggcgtttgtgggtagat
gacagcaaagccacgaacattgatgccaccttacaagctctaaaaacctttaaaaaccaa
aaaatccatttgattttagggggcgatattaaaggggtcaatttaacccccctttttgaa
gaatttaaaaactataaaataagcctttatgccataggatcaagcgcttctatcatccaa
gctttagcgttagaatttaatgtttcttgtcaagtttgtttaaagttagaaaaagcggtt
caagaaattaaaagcgttttattacaaaatgaagtcgctttgctttcacccagcgcggcc
agtttggatcaattttcttcgtataaagaaaggggtgaaaaatttaaggcgtttgtttta
aaagattaa
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