Helicobacter pylori SJM180: HPSJM_02505
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Entry
HPSJM_02505 CDS
T01323
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm03030
DNA replication
hpm03430
Mismatch repair
hpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPSJM_02505
03430 Mismatch repair
HPSJM_02505
03440 Homologous recombination
HPSJM_02505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpm03032
]
HPSJM_02505
03400 DNA repair and recombination proteins [BR:
hpm03400
]
HPSJM_02505
Enzymes [BR:
hpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPSJM_02505
DNA replication proteins [BR:
hpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPSJM_02505
DNA repair and recombination proteins [BR:
hpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPSJM_02505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
ADO02097
LinkDB
All DBs
Position
494523..495647
Genome browser
AA seq
374 aa
AA seq
DB search
MKISVSKNDLENTLRYLQAFLDKKDASSIASHIHLEVIKEKLFLKASDSDIGLKSYIFTQ
SSDKEGVGTINGKKFLDIISCLKDSNIVLETKDDSLVIKQNKSSFKLPMFDADEFPEFPV
IEPKVSIEVNTPFLVDAFKKIAPVIEQTSHKRELAGVLMQFDQKHQTLSVVGTDTKRLSY
TQLEKVSIHSTEEDISCILPKRALLEILKLFYENFSFKSDGMLAVIENETHTFFTKLIDG
NYPDYQKILPKEYTSSFTLGKEEFKESIKLCSSLSSTIKLTLEKNNALFESLDSEHSETA
KTSVEIEKGLDIEKAFHLGVNAKFFLEALNALGTTQFVLKCNEPSSPFLIQEPLDEKQSH
LSAKISTLMMPITL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcagtgttagtaaaaacgatttagaaaatactttgcgctacttgcaagctttt
ttggataaaaaggacgcttcttctatcgcttcacacatccatttagaagtcattaaagaa
aagctttttttaaaggctagcgattccgatattggactaaaaagctatatttttacgcaa
tctagcgataaagagggcgtaggcacgatcaatgggaaaaagtttttggatattatctca
tgtttaaaagactctaatattgttttagagactaaagatgatagcttggtgatcaaacaa
aataaaagctctttcaaactccccatgtttgacgctgatgagttccctgaattccctgtt
attgagcccaaagtgagtatagaagtcaataccccctttttggtagatgcgtttaaaaag
atcgctcccgtgattgagcaaactagccataaaagggaattagccggtgttttaatgcaa
tttgatcaaaaacatcaaaccctttcagtggtaggcacggataccaagcggctttcttac
acgcagttagaaaaagtctctatccattccactgaagaagatatttcttgcattttacct
aaaagggctttattagaaatccttaagcttttttatgaaaatttcagttttaaaagcgat
ggcatgctagcggtgattgaaaacgaaacgcacacttttttcaccaagctcattgatggg
aattaccctgattatcaaaaaatcctccccaaagaatacacttcttctttcactttaggc
aaggaagaatttaaagagagcattaaattgtgcagttctttaagctccaccattaaactc
actttagaaaaaaacaacgctttgtttgaatctttggattctgagcatagcgaaacggct
aaaacctctgttgagattgaaaaaggtttggatattgaaaaagcctttcatttgggcgtg
aacgctaaatttttccttgaagccttaaacgctttagggacaacgcaatttgttttaaaa
tgcaatgagccttcatcgccttttttgatccaagaaccccttgatgaaaagcaaagccac
ttgagcgctaaaatttccactttgatgatgccaatcacattataa
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