KEGG   Helicobacter pylori SJM180: HPSJM_02565
Entry
HPSJM_02565       CDS       T01323                                 
Name
(GenBank) cag pathogenicity island protein D
  KO
K12109  cag pathogenicity island protein 24
Organism
hpm  Helicobacter pylori SJM180
Module
hpm_M00564  Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:hpm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpm02044]
    HPSJM_02565
Secretion system [BR:hpm02044]
 Type IV secretion system
  Cag pathogenicity island (PAI) protein
   HPSJM_02565
SSDB
Motif
Pfam: CagD PFO_beta_C IcmF-related_N
Other DBs
NCBI-ProteinID: ADO02109
LinkDB
Position
506517..507167
AA seq 216 aa
MAKVEELAKLINNNSNKKLRGFFLKVLLSLVVFSLYGLANDDNQAKKEALEKEKNTPNGL
VYTNLDFDSFKATIKNLKDKKVTFKEVNPDIIKDEVFDFVIVNRVLKKIKDLKHYDPIIE
KIFDEKGKEMGLNVELQINPEVKDFFTFKSISTTNKQRCFLSLRGETREILCDDKLYNVL
LAVFNSYDPNDLLKHISTVESLKKIFYTITCEAVYL
NT seq 651 nt   +upstreamnt  +downstreamnt
ttggcgaaagtggaggagctagctaaattgatcaataataatagtaataaaaaactgaga
ggcttttttttgaaagttctcttaagtctcgttgttttcagtttgtatgggttagcaaat
gatgataatcaagccaaaaaagaagcgctagaaaaagaaaaaaacactcccaatgggctt
gtttatacgaatttagattttgatagtttcaaagcgactatcaaaaatttgaaagacaag
aaagtaactttcaaagaagtcaatcccgatattatcaaagatgaagtttttgatttcgtg
attgtcaatagagtccttaaaaaaataaaggatttgaagcattacgatcccattattgaa
aaaatctttgatgaaaagggtaaagaaatgggactgaatgtagaattacagatcaatcct
gaagtgaaagacttttttactttcaaaagcatcagcacgaccaacaaacaacgctgcttt
ctgtcattgcgcggggaaacaagagaaattttatgcgatgataagctatataatgtttta
ttggccgtattcaattcttatgaccctaatgatcttttgaaacacattagcaccgtagag
tctctcaaaaaaatcttttatacgattacatgtgaagcggtatatctataa

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