Helicobacter pylori SJM180: HPSJM_03125
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Entry
HPSJM_03125 CDS
T01323
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPSJM_03125 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpm01007
]
HPSJM_03125 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpm03016
]
HPSJM_03125 (aspS)
03029 Mitochondrial biogenesis [BR:
hpm03029
]
HPSJM_03125 (aspS)
Enzymes [BR:
hpm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HPSJM_03125 (aspS)
Amino acid related enzymes [BR:
hpm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HPSJM_03125 (aspS)
Transfer RNA biogenesis [BR:
hpm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HPSJM_03125 (aspS)
Prokaryotic type
Other AARSs
HPSJM_03125 (aspS)
Mitochondrial biogenesis [BR:
hpm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HPSJM_03125 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
DUF1967
Motif
Other DBs
NCBI-ProteinID:
ADO02217
LinkDB
All DBs
Position
628555..630288
Genome browser
AA seq
577 aa
AA seq
DB search
MRSHFCAEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKAL
EVRSEFVLVAKGKARLRGPGLENPKLKTGKIEIVLEELVIENKSATPPIEIGNKNVNEDL
RLKYRYLDLRSLSAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPS
RVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFTQIDAEMSFCS
ENDVMGVVEDLLQEIFKAIGHNISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGDCFM
DSSNAIFSNIAQDPKNKRIKALNVKGADAIFSRSVLKELEEFVRQFGAQGLAYLQIKEDG
IKGPLVKFLSEKGLKNILEKTGAKAGDIVFFGAGDKEIVLDYMGRLRLKVAETLDLIDKD
ALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIECKDLEEIEAHAYDVVLNGVELGGGSI
RIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSSSI
RDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtcatttctgtgcagaaattagtgaaaaagatgtgggtaaaaccatcaaagtg
gccgggtggtgtaacacttatagagaccatggaggcgtggtttttattgatttaagggat
aaaagcggtttagtgcaactggtctgtgatcctagctctaaggcttatgaaaaggcttta
gaagttaggagtgaatttgtgctagtggctaaaggaaaagcgcgtttaagagggcccggg
ttagaaaaccctaaattaaagaccggtaaaattgaaattgttttagaagagttagtcatt
gaaaataaaagcgctaccccaccgattgaaattggcaataaaaatgtgaatgaagatttg
cgcttgaaataccgctatttggatttacgctctttgagtgcttatgaaatctttaaattg
cgcagcgaagtggctttaatcactcgtaacgctttagcccaaaagggctttttagagatt
gaaacccccattttgtctaaaaccacgcctgagggggctagggattatttagtgccaagc
agggtgcatgagggcgaatttttcgcgctccctcaaagcccgcaattgttcaaacagctt
ttaatggtggggggaatggacaggtattttcaaatcgctcgttgctttagagatgaagat
ttgagagcggacaggcagccagaattcacgcaaattgatgcggaaatgagtttttgtagc
gaaaatgatgtgatgggcgtggtggaagatttgttgcaagagatttttaaagcgattggg
cataatatttctaaaccttttaaacgcatgccttataaggaagcgatggaaaattatggg
agcgataagccggatttacgctttgaattgcctttaatagaagtgggggattgttttatg
gacagctcaaacgctattttttctaatatcgcgcaagatcctaaaaacaaacgcattaaa
gctttgaatgttaagggggctgatgcgatttttagccgcagcgttttaaaagaattggaa
gaatttgtgcgccaatttggggctcaaggcttggcgtatttgcaaattaaagaagatggg
attaaagggcctttagttaaatttttaagcgaaaaggggcttaagaatattttagaaaaa
actggtgcaaaagctggggatattgtcttttttggagccggggataaagaaatcgtgtta
gattacatggggcgcttgcgcttgaaggtggctgaaacgcttgatttgattgataaagac
gctttgaatttcttatgggtagtcaatttccccatgtttgaaaaaaccgaaaacggctat
catgccgcgcaccacccttttacgatgcctaaaaatatagaatgcaaagatttagaagag
attgaagcgcatgcgtatgatgtggtgcttaatggcgtggagcttggtgggggaagcatt
aggattcataaagaagaaatgcaaaaaaaagtctttgaaaaaatcaatatccacgaagag
gaagcgcaaaagaaatttggctttttactagaagcactaaagtttggcgctcctcctcat
gggggctttgcgataggctttgatcgcttgatcatgctaatgacaaaatctagtagcatt
agagatgtgatcgctttccctaaaacgcaaaaagcttcatgcttattgactgatgcacct
agccccattaatgaagagcaattaagagaattacacattcgcttgagaaaataa
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