Helicobacter pylori SJM180: HPSJM_03935
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Entry
HPSJM_03935 CDS
T01323
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPSJM_03935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpm03021
]
HPSJM_03935
03400 DNA repair and recombination proteins [BR:
hpm03400
]
HPSJM_03935
Enzymes [BR:
hpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPSJM_03935
Transcription machinery [BR:
hpm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPSJM_03935
DNA repair and recombination proteins [BR:
hpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPSJM_03935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF2533
Motif
Other DBs
NCBI-ProteinID:
ADO02377
LinkDB
All DBs
Position
complement(800060..800284)
Genome browser
AA seq
74 aa
AA seq
DB search
MKKERTESLVAQALKNIGNDRYMLDNLVFARVKQLNAGAKTLVNMDPKRHKLVDIAIREI
AEGKIDIDRIDERN
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaagagagaacagagagtttagtcgctcaagccttaaaaaatattgggaacgac
cgctacatgctagataatttggttttcgctcgggtgaagcaattaaacgccggagccaaa
actttagtgaatatggaccctaagcgtcataaattagtggatattgccattagagaaatc
gctgaagggaaaattgatatagacaggatagatgaacgaaattga
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