Helicobacter pylori SJM180: HPSJM_04240
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Entry
HPSJM_04240 CDS
T01323
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
hpm
Helicobacter pylori SJM180
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpm03032
]
HPSJM_04240
03036 Chromosome and associated proteins [BR:
hpm03036
]
HPSJM_04240
03400 DNA repair and recombination proteins [BR:
hpm03400
]
HPSJM_04240
DNA replication proteins [BR:
hpm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HPSJM_04240
Chromosome and associated proteins [BR:
hpm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HPSJM_04240
DNA repair and recombination proteins [BR:
hpm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HPSJM_04240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
HU-CCDC81_euk_2
S4
Motif
Other DBs
NCBI-ProteinID:
ADO02438
LinkDB
All DBs
Position
858384..858668
Genome browser
AA seq
94 aa
AA seq
DB search
MNKAEFIDLVKEAGKYSSKREAEEAISAFTLAVETALSKGESVELIGFGKFETAEQKGKE
GKVPGSDKTYKTEDKRVPKFKPGKILKQKVEEGK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcggaatttattgatttggttaaagaagcgggtaaatacagcagcaaaaga
gaagccgaagaagcgatcagtgcctttactctagcggtagaaacagctttaagcaagggt
gagagcgtggagttgattggttttggcaaatttgaaaccgcagagcaaaaaggcaaagag
ggtaaagttccaggaagcgataaaacttataaaactgaagacaaacgagtgcctaaattc
aaacctggcaaaatccttaaacaaaaagttgaagaaggcaagtaa
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