Helicobacter pylori SJM180: HPSJM_04335
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Entry
HPSJM_04335 CDS
T01323
Name
(GenBank) ABC transporter, ATP-binding protein
Organism
hpm
Helicobacter pylori SJM180
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
RsgA_GTPase
AAA_29
AAA_18
AAA_22
AAA
AAA_16
AAA_17
MMR_HSR1
RNA_helicase
AAA_28
AAA_15
TsaE
AAA_24
AAA_14
Rad17
AAA_5
RuvB_N
nSTAND3
MeaB
AAA_33
NACHT
CLP1_P
Roc
NTPase_1
DUF87
NPHP3_N
DUF815
Zeta_toxin
IstB_IS21
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
ADO02454
LinkDB
All DBs
Position
complement(874959..876560)
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AA seq
533 aa
AA seq
DB search
MLQTINLTQRYATKKLFENVNIKLDKNKRYGLIGANGVGKSTFLKILSKSIDCSSGEVII
TSGMKMGVLGQDQYAFEDLSLKDAVLIGNRRLYDAIKEKERLYTEGDLSDDKVNARLGEL
ETICVEEDPMYECEVVIEKILEDLGIPSSKHNDLMKTLPSSDKFKILLAQVLFPKPDILL
LDEPTNNLDLNAIEWLENNLKRHEGTMVVISHDRHFLNAVCTHILDLDFYSVREFSGNYD
DWYIASTLIAKQQEAERNKKLKEKEELEKFIARFSANASKAKQATSRQKQLDKLDIQSLA
VSSRRDPSIIFKPKRTIGNEALECENISKSYDGQIVLNQVSLKVMPKDKIALIGPNGVGK
STLCKILVEELKPDTGVVKWGATVLKGYFPQNVSEEISGEETLYQWLFNFNKKIESAEVR
NALGRMLFNGEEQEKCVNALSGGEKHRMVLSKLMLEGGNFLVLDEPTNHLDLEAIIALGE
ALFKFDGAVICVSHDRELIDAYANRIIELVPSPKGASIIDFKGSYEEYLASKK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaaccatcaacttaacgcaacgctatgcgactaaaaaattgtttgaaaacgtg
aatatcaagctggataaaaacaagcgctacgggctgattggggctaatggcgtaggaaag
tccacttttttaaagattttaagcaagagcattgattgcagcagtggggaagtcatcatc
acaagcggcatgaaaatgggggttttagggcaggatcaatacgcttttgaagatttgagc
cttaaagatgcggttttgataggcaataggcgtttgtatgacgctatcaaagaaaaagag
cgcttatacaccgaaggcgatttgagcgatgataaagtgaatgcgagactaggggagtta
gaaaccatttgcgtggaagaagatcccatgtatgaatgcgaagtggtgattgaaaaaatc
ctagaagatttaggcattcctagctctaaacacaacgatctgatgaaaaccttgccaagc
agcgataagtttaaaatccttctcgctcaagttttattccctaaaccggatattttgctt
ttagatgagccgaccaacaacctggatttaaacgccattgaatggctagaaaacaacctc
aaacgccatgaaggcacgatggtagtcattagccatgacaggcattttttaaatgcggta
tgcacgcacattttggacttggatttttacagcgtgcgcgagtttagcgggaattatgac
gattggtatatcgcttctactctgatcgctaaacagcaagaggccgaacgcaataaaaaa
ctcaaagaaaaagaagagctggaaaaattcatcgctcgttttagcgctaacgcttctaaa
gccaagcaagccacaagccgccaaaaacaactggataaattagacattcaaagcttagcg
gtatccagtaggagagatcctagcattattttcaaacccaaacgcaccattggtaatgaa
gctttagagtgcgaaaacatctctaagagttatgacgggcaaatcgttttaaatcaagtg
agcttgaaagtgatgcctaaagataaaatcgctctcatagggccaaatggcgtgggtaaa
tccacgctttgtaaaattttagtagaagagttaaagcccgatacgggcgtggtgaaatgg
ggagcgacggttttaaaaggctatttccctcaaaacgtgagcgaagaaattagcggggaa
gagaccttgtatcaatggctttttaatttcaataaaaagattgaaagcgcagaggtgaga
aacgctttagggaggatgctttttaatggcgaagagcaagaaaagtgcgtgaacgcttta
agcggaggcgaaaaacaccgaatggttttatccaagctcatgctagagggggggaatttt
ttagtcctagatgagccaaccaaccacctagatttagaagccattatcgctttaggcgaa
gcgctctttaaatttgatggggcggtgatttgcgtaagccatgacagagagctcattgat
gcgtatgctaataggatcattgaattagtcccaagccctaaaggcgcttcaatcattgat
tttaaaggcagttatgaagagtatttagcgagcaaaaaatga
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