Helicobacter pylori SJM180: HPSJM_04880
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Entry
HPSJM_04880 CDS
T01323
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm00540
Lipopolysaccharide biosynthesis
hpm01100
Metabolic pathways
Module
hpm_M00866
KDO2-lipid A biosynthesis, Raetz pathway, non-LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPSJM_04880
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpm01005
]
HPSJM_04880
Enzymes [BR:
hpm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
HPSJM_04880
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
HPSJM_04880
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
HPSJM_04880
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
HPSJM_04880
Lipopolysaccharide biosynthesis proteins [BR:
hpm01005
]
Lipid A
HPSJM_04880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Motif
Other DBs
NCBI-ProteinID:
ADO02556
UniProt:
E1Q065
LinkDB
All DBs
Position
complement(987919..989100)
Genome browser
AA seq
393 aa
AA seq
DB search
MFKFFYLLFLTLGHLLGAPFIFFWSFKEKYRHSLKARFFLKDNFLKSEPVFWFHACSYGE
VKSLEPIVQALKEPILISVTTNTGFELAAQTYQNLEHIEVRYLPFETLLFAWKKNLKRLK
TLVVTEAELWFNVFDTAQKLGAKTMLINARISVRSYPKYQRFSFFYALLFKRIDLVLAQS
KDDKKRLLNLGAKKVVDFLNIKRFSKPVTASFYPKNPSALNIVLASTHEGEEELGLKAFL
KFKKTHKNARLFIVPRHPERFKSVQNLLQDALKTTRFSWECFSSKGFVECDILLVDRLGE
LNNFYQIADIVILGGSFVKMGGHNPLEPAFFNARLITGEYIFNQVALFELIKPYKIVPKE
DLLDALLDYKNLGVARFLENGHDLNELLAFIKR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaagtttttctaccttttatttttaactttggggcatcttcttggtgcgcctttc
atctttttttggagttttaaggaaaaataccgccattctttaaaggctcgtttttttctc
aaagacaattttttaaaaagcgagccggttttttggtttcatgcatgctcttatggggag
gtcaaatccttagagccaatcgttcaagctttaaaagagccgattttaattagcgttacc
actaataccggttttgaattagccgctcaaacttaccagaatttggagcatatagaagtg
cgttacttgccttttgaaaccctattatttgcatggaaaaaaaacttaaaacgcttaaaa
actttggtggttacagaagcggaattgtggtttaatgtgtttgatacggctcaaaaatta
ggggcaaaaaccatgctcattaacgctaggatcagtgttcgttcttaccctaaataccag
cgtttttcttttttttatgcgcttttattcaaacgcattgatttggttttagcgcaaagc
aaggacgataaaaagcgcttgttgaatctaggggcaaaaaaagtggtggattttttgaat
atcaagcgtttttcaaagcctgtaaccgcttcgttttaccctaaaaacccaagcgcttta
aacattgttttagccagcacgcatgagggtgaagaggaattagggttaaaagcgttttta
aagttcaaaaagacgcataaaaacgcaaggctttttatcgtgccgcgccaccctgagcgt
tttaaaagcgtgcaaaatttattgcaagatgctttaaaaacgactcgttttagttgggag
tgtttttcttcaaagggttttgtggaatgcgatattttgttagtggatcgcttgggggaa
ttgaataacttctatcaaatcgcagatattgtcattttagggggttcgtttgtcaaaatg
ggggggcataaccctttagagccggcgttttttaatgcacgcttgatcacaggggagtat
attttcaaccaagtagcgttgtttgaattaatcaagccttacaaaatcgttccaaaagag
gatttgttagacgctcttttagattacaaaaatttaggcgtggcgcgttttttagagaat
gggcatgatttaaacgaattgctcgcattcattaaacgttaa
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