Helicobacter pylori SJM180: HPSJM_05190
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Entry
HPSJM_05190 CDS
T01323
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HPSJM_05190 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hpm03011
]
HPSJM_05190 (rpsA)
Ribosome [BR:
hpm03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HPSJM_05190 (rpsA)
Bacteria
HPSJM_05190 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
S1CSD-TOTE-1
CsrA
RuBisCo_chap_C
CBFD_NFYB_HMF
GspL_C
Chordopox_A30L
RuvA_N
Motif
Other DBs
NCBI-ProteinID:
ADO02609
LinkDB
All DBs
Position
1055026..1056696
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AA seq
556 aa
AA seq
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MSKIADDQNFNDEEENFAKLFKKELEKEETLEKGTIKEGLIVSINENDGYAMVSVGGKTE
GRLALSEITDEKGQLLYQKNDPIIVHVSEKGEHPSVSYKKAISQQKIQAKIEELGENYEN
AIIEGKIVGKNKGGYIVESQGVEYFLSRSHSSLKNDANHIGKRIKACIIRVDKENHSINI
SRKRFFEVNDKRQLEISKELLEAKEPVLGVVRQITPFGIFVEAKGIEGLVHYSEISHKGP
VNPEKYYKEGDEVYVKAIAYDEEKRRLSLSIKATIEDPWEEIQDKLKPGYAIKVVVSNIE
HYGVFVDIGNDIEGFLHVSEISWDKNVSHPSHYLSVGQEIDVKIIDIDPKNRRLRVSLKQ
LTNRPFDVFESKHQVGDIIEGKVATLTDFGAFLNLGGVDGLLHNHDAFWDKDKKCKDHYK
IGDVIKVKILKINKKDKKISLSAKHLVTSPTEEFAQKHKTDSVIQGKVVSIKDFGVFINA
DGIDVLIKNEDLNPLKKDEIKIGQEITCVVVAIEKSNNKVRASVHRLERKKEKEELQAFN
TSDDKMTLGDILKEKL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagatagcagatgatcagaactttaatgacgaggaggaaaacttcgcaaaactc
tttaaaaaagaattagaaaaagaagaaaccctagaaaaaggcactattaaagaagggcta
atcgtttccatcaatgagaatgatggttatgccatggtgagcgtgggcggtaagacagaa
ggtcgtttggctttaagcgagatcaccgatgaaaaggggcagttgctgtatcaaaaaaat
gaccccattatcgtgcatgtgtccgaaaaaggtgaacaccctagcgtttcttacaaaaag
gccatctcccaacaaaagattcaagctaaaattgaagaattaggcgaaaactatgaaaac
gccattattgaaggcaagattgtaggcaagaataaagggggttatatcgtggagtctcaa
ggcgtggagtatttcctctcccgctcgcactcttctttaaagaatgacgcaaaccatatc
ggcaaacgcattaaagcatgcatcattcgtgtggataaggaaaaccattctatcaatatt
tctcgcaaacgattctttgaagtcaatgacaaacgacaacttgagatttctaaagaattg
ttagaagctaaagagccggtgttaggggttgtgcgccagatcactccttttggcattttt
gtagaagctaaggggattgagggcttggttcattattctgaaatcagccataaaggaccg
gtaaaccctgagaaatactacaaagagggcgatgaagtctatgtcaaagccatcgcttat
gatgaagaaaaaagacgcctttcactctccataaaagcgaccatagaagacccatgggaa
gagatccaagacaaactaaaacccggatacgccattaaggtggtggtgagcaatattgaa
cattacggggtgtttgtggatattggtaatgatattgaaggctttttgcatgtttctgaa
atctcttgggataaaaacgtcagccaccctagccattacttgagcgtgggacaagaaatt
gatgtgaagatcattgacattgatcctaaaaaccgccgcttaagggtttctttaaaacaa
ctcactaacaggccttttgatgtttttgaatctaaacaccaagtgggagatattatagag
ggcaaagtggcgactttaacggattttggggcgtttttgaatctgggtggggtggatggt
ttgctccacaatcacgacgctttttgggataaagataaaaaatgcaaagaccactataaa
attggcgatgtgatcaaagtgaaaatccttaaaatcaacaaaaaagataaaaagatttct
ttgagcgcgaagcacttggtgacttcccctacagaagaattcgctcaaaagcataaaaca
gacagcgtgattcaaggcaaagtggtgagtattaaggattttggcgttttcattaatgct
gatggcattgatgtgctgatcaaaaatgaagatttgaaccccttgaaaaaagatgaaatc
aaaatagggcaagaaatcacatgcgtggtggttgcgattgaaaaatctaacaacaaggtg
cgtgcttctgtgcataggttagagcgcaaaaaagaaaaagaagaattgcaagcttttaac
acgagcgatgataaaatgactttaggggatattctcaaagaaaaactctaa
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