Helicobacter pylori SJM180: HPSJM_05250
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Entry
HPSJM_05250 CDS
T01323
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hpm
Helicobacter pylori SJM180
Pathway
hpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPSJM_05250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpm03400
]
HPSJM_05250
Enzymes [BR:
hpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPSJM_05250
DNA repair and recombination proteins [BR:
hpm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPSJM_05250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
PriA_3primeBD
AAA_19
AAA_22
ADDB_N
PhoH
nSTAND3
AAA_7
AAA_30
RecA
GpA_ATPase
CobU
Motif
Other DBs
NCBI-ProteinID:
ADO02621
LinkDB
All DBs
Position
complement(1068526..1070385)
Genome browser
AA seq
619 aa
AA seq
DB search
MFYHLIAPLKNKTPPLTYFSKERHKKGALVNIPLRNKTLLGVVLEEVSKPSFECLELEKT
PYFLLPFQIELAIFIAQYYSANLSSVLNLFAPFKECDLVGLEKIEPTLNALSQTQTNALK
ELQKHPASLLFGDTGSGKTEIYMHAIAQTLEQKKSALLLVPEIALTPQMQQRLKRVFKEN
LGLWHSKLSQNQKKQFLEKLYSQEIKLVVGTRSALFLPLKELGLIVVDEEHDFSYKSHQS
PMYNARDLCLYSSHKFPIQVVLGSATPSLSSYQRFKDKALVRLKGRYTPTQKNIIFEKTE
HFITPKLLEALQQVIDKNEQAIIFVPTRANFKTLLCQNCYKSVQCPFCSVNMSLHLKTNK
LMCHYCHFSSPIPKICSACQSEVLVGKRIGTMQVLNELEGLLKGAKIAILDKDHTSTPKK
LHNILNDFNTQKTNILIGTQMISKGHDYAKVSLAVVLGIDNIIKSNSYRALEEGVSLLYQ
IAGRSARQISGQVFIQSTETDLLENFLEDYEDFLQYELQERCELYPPFSRLCLLEFKHKN
EEKAQQLSLKASQTLSSCLEKGVTLSNFKAPIEKIASSYRYLILLRSKDPLSLIKSVHAF
LKTAPSIPCSVNMDPVDIF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcacttgatcgctcctttaaaaaataaaaccccccctttaacttacttttct
aaagaacggcataaaaaaggagcgttagtcaatatccctttaaggaataaaacgcttttg
ggcgtcgttcttgaagaagtttcaaaaccctcttttgaatgcctagaattggaaaaaacc
ccttattttttactcccctttcaaatagagctcgctatttttatcgctcaatattactcg
gctaatctttcttcagtcttaaacctttttgccccttttaaagaatgcgatttagtgggg
ttagaaaaaattgagcctactcttaacgcgttgagccaaacgcaaaccaacgctttaaaa
gaattgcaaaaacatccagcaagcttgctttttggcgatacgggtagcgggaaaaccgaa
atttatatgcatgcaatcgctcaaactttagagcaaaaaaaaagcgctttgttgttagtg
ccagaaatcgctctcacccctcaaatgcaacaacgccttaaaagggtttttaaagaaaat
ttaggcttgtggcatagcaaactctctcaaaatcaaaaaaaacaatttttagaaaagctt
tattcgcaagaaatcaaattagtggtaggcacacgaagcgcgttgtttttgccccttaaa
gagttgggtttgattgttgtagatgaagagcatgacttttcttataaatcccatcaaagc
cctatgtataacgctagggatttatgcttgtattcatcccataaattccctattcaagtg
gttttaggctctgctacgccaagtttgagtagttaccaacgctttaaagataaggcttta
gtgcgcttaaaagggcgctacacccctacgcaaaaaaacattatttttgaaaaaaccgag
cattttatcacgcccaaactcctagaagcgctgcaacaagtgatagacaaaaacgagcaa
gccattatttttgtgcctacaagggctaatttcaaaaccttgctgtgccaaaattgttac
aaaagcgttcaatgccccttttgcagcgtgaatatgagtttgcatttaaagaccaacaaa
ctcatgtgccattattgccatttttcaagccctatccctaaaatttgcagtgcatgccaa
agcgaagttttagtgggtaaaaggataggcaccatgcaagtgttgaacgagttggaaggc
cttttgaaaggcgctaaaatagcgattttagataaagatcacaccagcacgccaaaaaaa
ctccacaatattttaaacgatttcaacactcaaaaaaccaatatcttaatcggcacgcag
atgataagcaaagggcatgattacgctaaagtgagtttagcggttgttttaggcatagac
aatatcattaaatctaatagttatagggctttagaagaaggcgtgtcgttactttatcaa
atcgctgggaggagtgctaggcaaatttctggccaagtgttcattcaaagcaccgaaacc
gatctattagaaaatttcttagaagattatgaagattttttacaatacgaattgcaagaa
aggtgcgaactctacccgcctttttcaaggctgtgtttgttggagtttaagcataaaaac
gaagaaaaagcccaacaattgagcctaaaagcctctcaaaccctttcttcgtgtttagaa
aagggcgtaacgctctctaactttaaagcccccattgaaaaaatcgcttcttcttatcgc
taccttattttgttgcgttccaaagaccctttaagcctaatcaaaagcgtgcatgcgttt
ttaaaaaccgcccctagtatcccttgcagcgtgaatatggatcctgtggatattttttaa
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